Gene omics information

Query gene ID Contig9005_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6581.4Contig9005_atContig9005--1e-14At3g05280integral membrane Yip1 family proteinS.X.H.G.
0.4963.7Contig4175_atContig4175--1e-19At3g07100protein transport protein Sec24, putativeS.X.H.G.
0.3747.9Contig14361_atContig14361--2e-1At2g11005glycine-rich proteinS.X.H.G.
0.3647.1Contig1159_s_atContig1159--1e-4At1g62540FMO GS-OX2 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 2)S.X.H.G.
0.3647.1Contig8742_atContig8742--1e-6At3g61600ATPOB1S.X.H.G.
0.3545.1Contig11464_atContig11464--6e-20At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)S.X.H.G.
0.3342.6Contig8331_s_atContig8331--2e-5At1g55255-S.X.H.G.
0.3138.6Contig6232_atContig6232--8e-1At2g01720ribophorin I family proteinS.X.H.G.
0.3037.0Contig5960_atContig5960--1e-16At3g18880ribosomal protein S17 family proteinS.X.H.G.
0.3037.0Contig5161_s_atContig5161--9e-3At1g54860unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.997.9GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
5.797.7GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.997.1GSM372964genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.897.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.696.8GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.496.6GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.196.2GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.995.8GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.795.5GSM373001genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.018e-238Contig2722_atContig2722--2e-32At2g33040ATP synthase gamma chain, mitochondrial (ATPC)C.G.S.X.
0.011e+034Contig7919_atContig7919--6e-23At4g01690PPOXC.G.S.X.
0.021e+034rbaal1i09_atrbaal1i09--8e-1At4g27900-C.G.S.X.
0.011e+034Contig12444_atContig12444--4e-20At1g09530PIF3 (PHYTOCHROME INTERACTING FACTOR 3)C.G.S.X.
0.011e+034Contig7362_atContig7362--5e-8At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)C.G.S.X.
0.021e+034Contig6636_atContig6636--4e-11At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.011e+034Contig4148_s_atContig4148--3e-6At1g07750cupin family proteinC.G.S.X.
0.015e+032Contig4555_atContig4555--4e-12At3g63470scpl40 (serine carboxypeptidase-like 40)C.G.S.X.
0.025e+032Contig3285_atContig3285--4e-1At2g40240pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.221e-1481Arabidopsis thalianaAt3g05280819692integral membrane Yip1 family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFP---C.G.S.X.
0.029e-136Glycine maxGmaAffx.55521.2.S1_atBM523654--6e-5At1g15020thioredoxin family proteinC.G.S.X.
0.610819Oryza sativaOs01g0610500AK105469.1-Conserved hypothetical protein1e-14At3g05280integral membrane Yip1 family proteinC.G.S.X.
0.152e-138Populus trichocarpaPtpAffx.675.5.S1_atCF227425hypothetical protein-4e-45At5g27490integral membrane Yip1 family proteinC.G.S.X.
0.377e-118424Triticum aestivumTa.7590.2.S1_a_atCK215141--9e-8At5g27490integral membrane Yip1 family proteinC.G.S.X.
0.078e-444Vitis vinifera1619947_atBQ794365hypothetical protein LOC100266603-5e-6At3g05280integral membrane Yip1 family proteinC.G.S.X.
0.630660Zea maysZm.3919.1.S1_atBG840867hypothetical protein LOC100194180-7e-16At3g05280integral membrane Yip1 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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