Gene omics information

Query gene ID Contig9001_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig9001_atContig9001--3e-3At4g08810SUB1S.X.H.G.
0.7187.1Contig9000_atContig9000--9e+0At2g21320zinc finger (B-box type) family proteinS.X.H.G.
0.4458.9Contig9473_atContig9473--6e-1At1g70480unknown proteinS.X.H.G.
0.4053.1Contig5907_atContig5907--3e-9At5g06960OBF5 (OCS-ELEMENT BINDING FACTOR 5)S.X.H.G.
0.2528.9HD13A06r_atHD13A06r--4e+0At3g43430zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1514.1HV_CEa0006I19r2_atHV_CEa0006I19r2--2e-1At3g60961ATP binding / nucleobase, nucleoside, nucleotide kinaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.598.6GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
7.598.6GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
7.398.5GSM261027ABA-Late-rep1GSE10328ABA experiment
7.398.5GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
7.398.5GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
6.298.0GSM261022ABA-Control-rep2GSE10328ABA experiment
4.997.1GSM261021ABA-Control-rep1GSE10328ABA experiment
4.696.8GSM688988 h salt stressed replicate 1GSE3097Barley1 salinity stress study
4.596.7GSM16082238% SWC rep3GSE6990Barley drought stress
4.396.4GSM261025ABA-Early-rep2GSE10328ABA experiment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-1169Contig7552_atContig7552--1e-5At2g04280unknown proteinC.G.S.X.
0.029e-238HT10J17u_atHT10J17u--1e-5At3g22240unknown proteinC.G.S.X.
0.019e-238149174_Reg_66-1115_at149174_Reg_66-1115--2e+0At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.014e-136Contig3097_atContig3097--4e+0At5g46730glycine-rich proteinC.G.S.X.
0.024e-136EBro02_SQ008_M09_atEBro02_SQ008_M09--5e-12At1g07790HTB1C.G.S.X.
0.014e-136Contig14149_atContig14149--4e-9At4g36980unknown proteinC.G.S.X.
0.012e+034Contig15491_atContig15491--2e-10At2g16460metal ion bindingC.G.S.X.
0.012e+034Contig14071_atContig14071NBS-LRR disease resistance protein homologue-2e+0At4g15733SCRL11 (SCR-Like 11)C.G.S.X.
0.022e+034HV_CEb0001H12r2_atHV_CEb0001H12r2--4e+0At5g16740amino acid transporter family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-344Arabidopsis thalianaAt4g08810826452SUB1Calcium binding protein involved in cryptochrome and phytochrome coaction---C.G.S.X.
0.061e-965Glycine maxGma.9593.1.A1_atBU547153--3e-23At4g08810SUB1C.G.S.X.
0.540860Oryza sativaOs07g0633600AK067310.1-Conserved hypothetical protein2e-8At4g08810SUB1C.G.S.X.
0.141e-1275Populus trichocarpaPtp.6363.1.S1_atBI784464--1e-45At4g08810SUB1C.G.S.X.
0.347e-143508Triticum aestivumTa.1440.3.S1_a_atCA629316--2e-1At3g04590DNA-binding family proteinC.G.S.X.
0.064e-961Vitis vinifera1613013_atCF205564.1--3e-39At4g08810SUB1C.G.S.X.
0.021e+034Zea maysZm.7916.1.A1_atCF624644--5e+0At5g5671060S ribosomal protein L31 (RPL31C)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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