Gene omics information

Query gene ID Contig8996_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9298.4Contig8996_s_atContig8996--3e-2At1g57560AtMYB50 (myb domain protein 50)S.X.H.G.
0.2122.6Contig4911_atContig4911--7e-1At5g09280pectate lyase family proteinS.X.H.G.
0.1919.6Contig10542_atContig10542--4e+0At4g16800enoyl-CoA hydratase, putativeS.X.H.G.
0.1919.6Contig16263_atContig16263--1e+0At2g22310ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4)S.X.H.G.
0.1919.6HD11C22r_s_atHD11C22r--1e+1At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)S.X.H.G.
0.1818.2Contig1243_atContig1243--1e-1At1g7406060S ribosomal protein L6 (RPL6B)S.X.H.G.
0.1818.2HZ48K22r_s_atHZ48K22rglyceraldehyde-3-phosphate dehydrogenase-3e-13At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)S.X.H.G.
0.1716.9Contig9531_atContig9531--4e-3At1g12040LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1)S.X.H.G.
0.1514.1HZ59C04r_s_atHZ59C04r--2e+0At3g15111unknown proteinS.X.H.G.
0.1514.1Contig3636_atContig3636--9e-9At5g21090leucine-rich repeat protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.499.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
9.499.0GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
8.898.9GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
8.798.9GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
8.798.9GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
8.498.8GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
8.398.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
7.898.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
7.298.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
6.998.3GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9301324Contig8997_atContig8997--2e+0At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.031e-240Contig338_s_atContig338--2e-39At1g09200histone H3C.G.S.X.
0.031e-240Contig6285_s_atContig6285--7e-2At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.031e-240Contig6285_atContig6285--7e-2At1g25300octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.031e-240Contig338_atContig338--2e-39At1g09200histone H3C.G.S.X.
0.035e-238Contig20288_atContig20288--1e+0At1g22970unknown proteinC.G.S.X.
0.025e-238Contig14535_atContig14535--5e-1At1g08830CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1)C.G.S.X.
0.012e-136Contig5785_atContig5785--2e-5At1g29370kinase-relatedC.G.S.X.
0.032e-136HM10P15r_atHM10P15r--6e-1At5g28660-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-240Arabidopsis thalianaAt1g57560842131AtMYB50 (myb domain protein 50)Member of the R2R3 factor gene family.---C.G.S.X.
0.036e-136Glycine maxPsAffx.psZS008xB06f_s_atPsAffx.psZS008xB06f--8e-4At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.203e-1997Oryza sativaOs07g0250300AK098969.1-Conserved hypothetical protein2e+0At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.032e-344Populus trichocarpaPtpAffx.139172.2.S1_s_atCV252129hypothetical protein-2e-5At3g59690IQD13 (IQ-domain 13)C.G.S.X.
0.672e-172605Triticum aestivumTa.9896.2.S1_atCD902100--4e-1At5g10390histone H3C.G.S.X.
0.035e-134Vitis vinifera1616177_atBQ800589similar to 3-methyladenine DNA glycosylase, putative; 31680-30045-2e+1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.194e-24111Zea maysZm.7541.1.A1_atBM341407hypothetical protein LOC100192095-6e+0At3g43110unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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