CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8976_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 84.7 Contig8976_at Contig8976 - - 1e-20 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
0.80 92.5 Contig8959_at Contig8959 - - 2e+0 At3g33393 unknown protein S.X. H.G.
0.67 84.7 Contig7117_at Contig7117 - - 8e-4 At3g17880 ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN) S.X. H.G.
0.67 84.7 Contig8181_at Contig8181 - - 2e-119 At1g55350 DEK1 (DEFECTIVE KERNEL 1) S.X. H.G.
0.67 84.7 HW08D24u_s_at HW08D24u - - 3e+0 At4g33360 terpene cyclase/mutase-related S.X. H.G.
0.50 66.9 Contig12806_at Contig12806 - - 3e-30 At1g50030 TOR (TARGET OF RAPAMYCIN) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.8 99.8 GSM282033 Malting_day4_Harrington_rep4 GSE11200 Expression data from malting barley seeds
23.5 99.8 GSM282030 Malting_day4_Harrington_rep2 GSE11200 Expression data from malting barley seeds
23.1 99.8 GSM282039 Malting_day4_Morex_rep2 GSE11200 Expression data from malting barley seeds
21.5 99.8 GSM282022 Malting_day4_Merit_rep4 GSE11200 Expression data from malting barley seeds
20.2 99.7 GSM282028 Malting_day1_Merit_rep1 GSE11200 Expression data from malting barley seeds
19.1 99.7 GSM282024 Malting_day4_Merit_rep2 GSE11200 Expression data from malting barley seeds
18.8 99.7 GSM282023 Malting_day4_Merit_rep3 GSE11200 Expression data from malting barley seeds
16.7 99.6 GSM282020 Malting_day4_Legacy_rep 3 GSE11200 Expression data from malting barley seeds
14.3 99.5 GSM282021 Malting_day4_Legacy_rep 2 GSE11200 Expression data from malting barley seeds
13.3 99.4 GSM282031 Malting_day1_Harrington_rep1 GSE11200 Expression data from malting barley seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 7e-61 234 Contig1774_at Contig1774 - - 2e-72 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.09 2e-5 50 Contig1771_s_at Contig1771 - - 1e+0 At2g20616 unknown protein C.G. S.X.
0.01 9e-2 38 Contig8186_at Contig8186 - - 2e-10 At5g65720 NFS1 C.G. S.X.
0.01 3e-1 36 Contig7937_s_at Contig7937 - - 1e-3 At5g11720 alpha-glucosidase 1 (AGLU1) C.G. S.X.
0.01 3e-1 36 Contig2888_at Contig2888 NADP-dependent malic enzyme - 2e-17 At5g11670 ATNADP-ME2 (NADP-malic enzyme 2) C.G. S.X.
0.01 3e-1 36 Contig7938_at Contig7938 - - 4e-4 At5g11720 alpha-glucosidase 1 (AGLU1) C.G. S.X.
0.01 3e-1 36 Contig3576_at Contig3576 - - 1e-8 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) C.G. S.X.
0.02 3e-1 36 Contig19552_at Contig19552 - - 6e+0 At5g47900 unknown protein C.G. S.X.
0.01 3e-1 36 Contig10866_at Contig10866 - - 3e-1 At3g19810 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 1e-20 101 Arabidopsis thaliana At3g14420 820665 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative F:glycolate oxidase activity;P:metabolic process;C:in 7 components;OBFMPA - - - C.G. S.X.
0.23 1e-24 115 Glycine max Gma.7309.2.S1_s_at CD408975 Peroxisomal glycolate oxidase - 4e-148 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.65 0 884 Oryza sativa Os04g0623500 AK068638.1 - (S)-2-hydroxy-acid oxidase, peroxisomal (EC1.1.3.15) (Glycolate oxidase) (GOX) (Short chainalpha-hydroxy acid oxidase) 7e-29 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.21 1e-9 65 Populus trichocarpa PtpAffx.46728.1.S1_at CV279430 hypothetical protein - 7e-100 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.83 0 1856 Triticum aestivum Ta.10548.1.S1_at CD908152 - - 5e-5 At3g14415 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.24 8e-35 147 Vitis vinifera 1622249_at CA817903 glycolate oxidase-like - 6e-153 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
0.62 0 860 Zea mays Zm.2298.2.A1_a_at BQ619139 hypothetical protein LOC100192687 - 1e-21 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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