CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8930_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 94.0 Contig8930_s_at Contig8930 - - 7e-1 At1g30040 ATGA2OX2 (GIBBERELLIN 2-OXIDASE) S.X. H.G.
0.71 87.1 Contig25108_at Contig25108 - - 5e+0 At3g43740 leucine-rich repeat family protein S.X. H.G.
0.67 84.7 Contig7125_s_at Contig7125 - - 6e+0 At3g52360 unknown protein S.X. H.G.
0.60 77.3 Contig7125_at Contig7125 - - 6e+0 At3g52360 unknown protein S.X. H.G.
0.50 66.9 Contig18975_at Contig18975 - - 4e-1 At2g45130 SPX3 (SPX DOMAIN GENE 3) S.X. H.G.
0.32 40.3 Contig24145_at Contig24145 - - 1e-1 At1g33100 MATE efflux family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.5 98.8 GSM372993 genotype: 11542 - pathogen isolates: K1 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.5 98.8 GSM372974 genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.9 98.7 GSM372997 genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.7 98.6 GSM372977 genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.2 98.5 GSM372975 genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.8 98.3 GSM372978 genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.8 98.3 GSM373000 genotype: 11542 - pathogen isolates: K1 - time: 16 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.4 98.1 GSM372992 genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.3 98.1 GSM373008 genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.9 97.9 GSM372998 genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.99 0 2857 Contig8930_at Contig8930 - - 7e-1 At1g30040 ATGA2OX2 (GIBBERELLIN 2-OXIDASE) C.G. S.X.
0.01 4e-1 36 Contig8350_at Contig8350 - - 3e-6 At1g43850 SEU (seuss) C.G. S.X.
0.01 4e-1 36 Contig10803_at Contig10803 - - 1e-1 At4g23890 unknown protein C.G. S.X.
0.02 4e-1 36 HV14B16u_x_at HV14B16u - - 3e-1 At5g59290 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3) C.G. S.X.
0.01 4e-1 36 Contig10803_s_at Contig10803 - - 1e-1 At4g23890 unknown protein C.G. S.X.
0.01 1e+0 34 Contig12420_at Contig12420 - - 8e-25 At1g64060 ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F) C.G. S.X.
0.01 1e+0 34 Contig23122_at Contig23122 - - 5e+0 At1g71080 unknown protein C.G. S.X.
0.01 6e+0 32 Contig14052_at Contig14052 - - 4e-10 At5g53130 CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1) C.G. S.X.
0.01 6e+0 32 Contig10113_at Contig10113 - - 5e-1 At5g47310 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-1 36 Arabidopsis thaliana At1g30040 839883 ATGA2OX2 (GIBBERELLIN 2-OXIDASE) Encodes a gibberellin 2-oxidase. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.40660.1.S1_at BE057881 - - 5e-3 At5g25540 CID6 (CTC-Interacting Domain 6) C.G. S.X.
0.02 6e+0 34 Oryza sativa OsAffx.32239.1.A1_at - - - 0 C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.153418.1.A1_at CV258125 - - 1e+0 At3g49310 - C.G. S.X.
0.02 5e-2 40 Triticum aestivum TaAffx.83954.1.S1_at CA647470 - - 2e-2 At1g47560 unknown protein C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1622236_at CB971900 hypothetical protein LOC100268024 - 2e-14 At3g01060 unknown protein C.G. S.X.
0.01 5e+0 32 Zea mays Zm.8741.1.A1_at BM349488 - - 1e+0 At3g16330 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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