Gene omics information

Query gene ID Contig8766_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.7Contig8766_atContig8766--8e-7At4g12130aminomethyltransferaseS.X.H.G.
0.5572.0Contig10647_atContig10647--2e-46At2g20930-S.X.H.G.
0.4762.2Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)S.X.H.G.
0.4458.9Contig11618_atContig11618--5e+0At2g11890adenylate cyclaseS.X.H.G.
0.4255.2Contig13332_atContig13332--2e+0At1g68280thioesterase-relatedS.X.H.G.
0.3240.3Contig24555_atContig24555--1e+0At2g45070SEC61 BETAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
73.1100.0GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
50.599.9GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
44.199.9GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
32.699.9GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
24.799.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
16.099.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.599.6GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seeds
11.099.2GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
10.099.1GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
8.498.8GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-136Contig11913_atContig11913--1e-1At3g17160unknown proteinC.G.S.X.
0.014e-136Contig2360_atContig2360--2e-27At1g31800CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)C.G.S.X.
0.022e+034EBem05_SQ002_F23_atEBem05_SQ002_F23--6e-2At4g25190unknown proteinC.G.S.X.
0.012e+034Contig20936_atContig20936--3e-5At3g21175ZML1 (ZIM-LIKE 1)C.G.S.X.
0.012e+034Contig3020_atContig3020--5e-107At2g2014026S protease regulatory complex subunit 4, putativeC.G.S.X.
0.012e+034Contig8747_atContig8747--9e-16At1g79470inosine-5'-monophosphate dehydrogenaseC.G.S.X.
0.012e+034Contig7569_atContig7569--9e-7At1g16190DNA repair protein RAD23, putativeC.G.S.X.
0.012e+034Contig5367_atContig5367--6e-5At3g06190BPM2 (BTB-POZ AND MATH DOMAIN 2)C.G.S.X.
0.016e+032rbags21b15_atrbags21b15--1e+0At5g57887unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-756Arabidopsis thalianaAt4g12130826821aminomethyltransferaseF:aminomethyltransferase activity;P:glycine catabolic process;C:cytoplasm;OBFMPA---C.G.S.X.
0.075e-654Glycine maxGmaAffx.80998.1.S1_atBE611879--2e-17At4g12130aminomethyltransferaseC.G.S.X.
0.532e-144513Oryza sativaOs06g0134800AK063692.1-Glycine cleavage T protein (aminomethyltransferase) family protein2e-10At4g12130aminomethyltransferaseC.G.S.X.
0.035e-963Populus trichocarpaPtpAffx.81117.2.S1_atCK318012--9e-19At4g12130aminomethyltransferaseC.G.S.X.
0.6801267Triticum aestivumTa.5840.1.S1_atBJ306840--2e-7At4g12130aminomethyltransferaseC.G.S.X.
0.014e+032Vitis vinifera1621891_atCF415470hypothetical protein LOC100242841-8e-2At5g4152040S ribosomal protein S10 (RPS10B)C.G.S.X.
0.413e-66252Zea maysZm.13636.1.S1_atAY107313.1aminomethyltransferase-3e+0At5g41030TCP family transcription factor, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage