Gene omics information

Query gene ID	Contig873_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.70	86.0	Contig873_s_at	Contig873	-	-	2e-121	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	S.X.	H.G.	Please select
0.78	91.2	Contig24782_at	Contig24782	-	-	3e-11	At3g19340	-	S.X.	H.G.	Please select
0.77	90.8	Contig11315_at	Contig11315	-	-	1e-4	At1g47970	unknown protein	S.X.	H.G.	Please select
0.69	85.5	Contig6155_at	Contig6155	-	-	7e-1	At4g36540	BEE2 (BR Enhanced Expression 2)	S.X.	H.G.	Please select
0.58	74.9	Contig9756_at	Contig9756	-	-	2e-47	At3g62220	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.54	70.3	Contig21992_at	Contig21992	-	-	1e+0	At3g56130	biotin/lipoyl attachment domain-containing protein	S.X.	H.G.	Please select
0.51	67.5	Contig10438_at	Contig10438	-	-	2e-14	At4g33260	CDC20.2	S.X.	H.G.	Please select
0.50	66.9	Contig17827_at	Contig17827	-	-	2e+0	At2g44110	MLO15 (MILDEW RESISTANCE LOCUS O 15)	S.X.	H.G.	Please select
0.49	63.7	Contig16853_at	Contig16853	-	-	6e-4	At2g02370	-	S.X.	H.G.	Please select
0.46	61.0	Contig9470_at	Contig9470	-	-	6e+0	At4g29980	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.3	99.8	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
25.9	99.8	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
23.7	99.8	GSM440967	Stressed palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
15.4	99.6	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
15.4	99.6	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
15.0	99.5	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
14.3	99.5	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
10.8	99.2	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
8.0	98.7	GSM398267	HS41-1_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.7	98.3	GSM398269	HS41-1_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	0	813	Contig326_x_at	Contig326	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.34	4e-93	341	Contig319_at	Contig319	-	-	2e-48	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.36	6e-86	317	Contig998_x_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.36	6e-86	317	Contig998_s_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.20	1e-65	250	rbags13d01_s_at	rbags13d01	-	-	4e+0	At3g46380	unknown protein	C.G.	S.X.	Please select
0.23	4e-56	218	HVSMEh0081E03r2_at	HVSMEh0081E03r2	-	-	2e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.23	4e-56	218	Contig44_s_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.23	4e-56	218	Contig44_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.11	3e-17	89	HV12F18u_x_at	HV12F18u	-	-	1e-8	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	2e-121	436	Arabidopsis thaliana	At5g02500	831020	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	encodes a member of heat shock protein 70 family.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.46	1e-61	238	Glycine max	PsAffx.CL1Contig20_s_at	PsAffx.CL1Contig20	-	-	2e-11	At3g12580	HSP70 (heat shock protein 70)	C.G.	S.X.	Please select
0.58	0	1409	Oryza sativa	Os.46024.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.51	3e-65	250	Populus trichocarpa	Ptp.2604.1.S1_x_at	CV262072	hypothetical protein	-	1e-162	At3g12580	HSP70 (heat shock protein 70)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.68	0	1978	Triticum aestivum	Ta.24515.1.S1_at	AF005993.1	HSP70	-	9e-122	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.50	1e-82	305	Vitis vinifera	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.53	0	785	Zea mays	Zm.12227.1.S1_at	AY104350.1	heat shock cognate 70 kDa protein 2	-	2e-53	At3g09440	heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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