CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8707_s_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 80.3 Contig8707_s_at Contig8707 - - 6e-4 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) S.X. H.G.
0.58 74.9 Contig8795_at Contig8795 - - 6e-1 At2g26500 cytochrome b6f complex subunit (petM), putative S.X. H.G.
0.55 72.0 Contig11890_at Contig11890 - - 4e-5 At4g21580 oxidoreductase, zinc-binding dehydrogenase family protein S.X. H.G.
0.38 49.5 Contig13944_at Contig13944 - - 3e-1 At2g47210 myb family transcription factor S.X. H.G.
0.38 49.5 Contig22799_at Contig22799 - - 1e+0 At4g32551 LUG (LEUNIG) S.X. H.G.
0.37 47.9 Contig18288_s_at Contig18288 - - 1e+0 At1g73325 trypsin and protease inhibitor family protein / Kunitz family protein S.X. H.G.
0.37 47.9 Contig10967_at Contig10967 - - 2e+0 At3g52900 unknown protein S.X. H.G.
0.35 45.1 Contig13218_at Contig13218 - - 3e+0 At5g64360 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
0.34 43.6 Contig14009_s_at Contig14009 - - 2e+0 At4g37020 unknown protein S.X. H.G.
0.32 40.3 Contig21692_at Contig21692 - - 3e+0 At2g35970 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.5 98.8 GSM213443 Barley seeds with P. aeruginosa PA5021 mutant for 12hr GSE8618 P. aeruginosa virulent factor to barley
7.3 98.5 GSM213441 Barley seeds control in Hoagland solution for 12hr GSE8618 P. aeruginosa virulent factor to barley
6.6 98.2 GSM146369 Golden Promise shoot Control, biological rep1 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.7 97.7 GSM146377 Maythorpe shoot Control, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.5 97.6 GSM146372 Golden Promise shoot Salt, biological rep 1 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.4 97.5 GSM146375 Maythorpe shoot Control, biological rep1 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.2 97.4 GSM146380 Maythorpe shoot Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.9 97.1 GSM213436 Barley seeds with P. aeruginosa PAO1 for 12hr GSE8618 P. aeruginosa virulent factor to barley
4.6 96.8 GSM146374 Golden Promise shoot Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.5 96.7 GSM146379 Maythorpe shoot Salt, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.73 0 1346 Contig8706_at Contig8706 - - 5e-4 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.21 4e-25 115 Contig7529_at Contig7529 - - 5e-5 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.10 2e-20 99 Contig7528_s_at Contig7528 - - 1e-2 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.02 7e-2 38 Contig7298_at Contig7298 - - 6e-13 At4g27700 rhodanese-like domain-containing protein C.G. S.X.
0.01 3e-1 36 Contig13579_at Contig13579 - - 2e+0 At1g12020 unknown protein C.G. S.X.
0.01 3e-1 36 Contig2985_s_at Contig2985 - - 9e-43 At5g13630 GUN5 (GENOMES UNCOUPLED 5) C.G. S.X.
0.02 1e+0 34 Contig6452_s_at Contig6452 - - 4e-10 At5g47860 unknown protein C.G. S.X.
0.01 4e+0 32 Contig7630_at Contig7630 - - 1e-12 At5g56290 PEX5 (PEROXIN 5) C.G. S.X.
0.01 4e+0 32 Contig7467_at Contig7467 - - 2e+0 At5g67580 TRB2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 6e-4 46 Arabidopsis thaliana At4g32400 829375 SHS1 (SODIUM HYPERSENSITIVE 1) Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol. - - - C.G. S.X.
0.06 2e-1 38 Glycine max Gma.10043.1.A1_at AI938068 - - 6e-8 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.49 5e-148 525 Oryza sativa Os06g0602700 CB644088 - Mitochondrial brown fat uncoupling protein familyprotein 1e-13 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.05 8e-1 36 Populus trichocarpa PtpAffx.206781.1.S1_at pmrna13465 hypothetical protein - 3e-18 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.85 0 1223 Triticum aestivum Ta.10612.1.S1_at BJ294990 - - 2e-1 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.05 3e-9 61 Vitis vinifera 1613421_at CD711287 hypothetical protein LOC100261079 - 2e-4 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
0.44 0 656 Zea mays Zm.5937.1.S1_at CK826690 - - 2e-8 At4g32400 SHS1 (SODIUM HYPERSENSITIVE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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