Gene omics information

Query gene ID Contig8661_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig8661_atContig8661--1e+0At3g48298unknown proteinS.X.H.G.
0.6077.3Contig7256_atContig7256--4e-8At1g52870peroxisomal membrane protein-relatedS.X.H.G.
0.4863.2HZ45N21r_atHZ45N21r--3e+0At3g49330invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.4661.0Contig7255_atContig7255--6e+0At3g26147unknown proteinS.X.H.G.
0.4458.9Contig4707_x_atContig4707--5e+0At2g35900unknown proteinS.X.H.G.
0.4458.9Contig4710_atContig4710--3e-1At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.198.9GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.598.2GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.398.1GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.097.9GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.796.9GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.596.7GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.196.2GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.096.0GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.895.7GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-238Contig3751_atContig3751--2e+0At5g24170-C.G.S.X.
0.024e-238Contig5862_atContig5862--1e-3At4g36890IRX14 (irregular xylem 14)C.G.S.X.
0.024e-238Contig9093_atContig9093--8e+0At3g09700DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.021e-136Contig8031_atContig8031--2e-47At1g69740HEMB1C.G.S.X.
0.021e-136Contig6075_atContig6075--3e+0At4g28940catalyticC.G.S.X.
0.011e-136Contig4930_atContig4930--8e-8At5g20710BGAL7 (beta-galactosidase 7)C.G.S.X.
0.031e-136Contig2083_s_atContig2083photosystem-I PSI-F subunit precursor-6e-7At1g31330PSAF (photosystem I subunit F)C.G.S.X.
0.021e-136Contig14778_atContig14778--7e-10At4g17640CKB2C.G.S.X.
0.021e-136Contig9728_atContig9728--4e-1At1g58100TCP family transcription factor, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e+034Arabidopsis thalianaAt3g482986240797unknown proteinF:unknown;P:unknown;C:unknown---C.G.S.X.
0.063e-240Glycine maxPsAffx.C10000031_s_atPsAffx.C10000031--2e-1At3g16510C2 domain-containing proteinC.G.S.X.
0.445e-69262Oryza sativaOs.11308.1.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.222363.1.S1_s_atpmrna39716hypothetical protein-3e+0At5g03520ATRAB8CC.G.S.X.
0.614e-99361Triticum aestivumTa.14235.3.S1_x_atCA682509--8e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)C.G.S.X.
0.049e-236Vitis vinifera1610917_atCD715674--2e-2At3g14670unknown proteinC.G.S.X.
0.361e-54212Zea maysZm.17438.1.A1_atCK347582VP15-3e-1At3g28970AAR3 (antiauxin-resistant 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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