Gene omics information

Query gene ID Contig8552_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.3Contig8552_atContig8552--2e+0At4g15830bindingS.X.H.G.
0.6380.3Contig5447_atContig5447--4e-62At5g10840endomembrane protein 70, putativeS.X.H.G.
0.5066.9Contig22314_atContig22314--5e+0At3g26770short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.5066.9Contig12674_atContig12674--4e-1At5g57850aminotransferase class IV family proteinS.X.H.G.
0.3647.1Contig5744_atContig5744--1e-7At2g40600appr-1-p processing enzyme family proteinS.X.H.G.
0.3647.1Contig1751_x_atContig1751--1e-1At1g15270-S.X.H.G.
0.2427.2Contig7136_atContig7136--3e-7At3g22420WNK2 (WITH NO K 2)S.X.H.G.
0.108.4Contig5533_atContig5533--2e-7At4g33070pyruvate decarboxylase, putativeS.X.H.G.
0.075.8Contig2916_atContig2916UDP-D-glucuronate decarboxylase-1e-33At2g47650UXS4 (UDP-XYLOSE SYNTHASE 4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.699.8GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
16.999.6GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
16.699.6GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
16.299.6GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
14.899.5GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.899.4GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.799.3GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
11.099.2GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
10.899.2GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.599.2GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-654Contig8166_atContig8166--4e-11At5g49940NFU2 (NIFU-LIKE PROTEIN 2)C.G.S.X.
0.031e-654Contig5238_atContig5238--2e-16At3g12290tetrahydrofolate dehydrogenase/cyclohydrolase, putativeC.G.S.X.
0.034e-652Contig17054_atContig17054--8e+0At5g52110HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208)C.G.S.X.
0.032e-550Contig5708_atContig5708--1e+0At2g47280pectinesteraseC.G.S.X.
0.032e-446Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)C.G.S.X.
0.042e-446Contig21692_atContig21692--3e+0At2g35970harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.022e-446Contig3421_atContig3421--7e-69At2g23080casein kinase II alpha chain, putativeC.G.S.X.
0.031e-344Contig10310_atContig10310--8e-3At1g75690chaperone protein dnaJ-relatedC.G.S.X.
0.021e-344Contig5709_atContig5709--3e-56At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt4g15830827264bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MPOF---C.G.S.X.
0.031e-242Glycine maxGmaAffx.12286.2.S1_atBM108265--1e-11At5g38510rhomboid family proteinC.G.S.X.
0.032e-138Oryza sativaOsAffx.11363.1.S1_x_at---0C.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.99689.1.S1_atDN484603--3e-1At1g70970F-box family proteinC.G.S.X.
0.493e-27123Triticum aestivumTaAffx.12568.1.S1_atBJ253952--8e+0At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.036e-444Vitis vinifera1618174_atCB001667--9e-2At3g59730receptor lectin kinase, putativeC.G.S.X.
0.033e-342Zea maysZm.6913.2.A1_a_atAI065646--9e-1At2g16060AHB1 (ARABIDOPSIS HEMOGLOBIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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