CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8457_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 66.9 Contig8457_at Contig8457 - - 2e-5 At2g22080 unknown protein S.X. H.G.
0.50 66.9 Contig19617_at Contig19617 - - 2e+0 At5g55320 membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-related S.X. H.G.
0.46 61.0 Contig12730_at Contig12730 - - 2e+0 At3g59640 glycine-rich protein S.X. H.G.
0.44 58.9 Contig12896_at Contig12896 - - 2e-3 At5g08630 DDT domain-containing protein S.X. H.G.
0.18 18.2 Contig15872_at Contig15872 - - 1e+0 At4g24410 unknown protein S.X. H.G.
0.13 11.6 Contig20397_at Contig20397 - - 2e-3 At1g53420 serine/threonine protein kinase-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.3 97.4 GSM282031 Malting_day1_Harrington_rep1 GSE11200 Expression data from malting barley seeds
4.3 96.4 GSM282033 Malting_day4_Harrington_rep4 GSE11200 Expression data from malting barley seeds
3.8 95.7 GSM431548 pathogen isolates: Mock - rep3 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.6 95.3 GSM431547 pathogen isolates: Mock - rep2 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.4 94.8 GSM431569 pathogen isolates: Mock inoculated control - rep2 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.4 94.8 GSM238414 Endosperm 8DAF; Seed development; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
3.3 94.6 GSM431549 pathogen isolates: Polymyxa graminis - rep1 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.1 94.1 GSM431550 pathogen isolates: Polymyxa graminis - rep2 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.1 94.1 GSM238424 Endosperm 48 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
3.1 94.1 GSM431551 pathogen isolates: Polymyxa graminis - rep3 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-6 50 Contig10100_at Contig10100 - - 6e-17 At4g21660 proline-rich spliceosome-associated (PSP) family protein C.G. S.X.
0.05 1e-4 46 EBro08_SQ003_C15_at EBro08_SQ003_C15 - - 2e-2 At3g21850 ASK9 (ARABIDOPSIS SKP1-LIKE 9) C.G. S.X.
0.03 8e-3 40 Contig20125_at Contig20125 - - 3e+0 At3g05540 - C.G. S.X.
0.03 3e-2 38 Contig1648_at Contig1648 - - 3e-18 At1g66200 ATGSR2 C.G. S.X.
0.03 3e-2 38 Contig9031_at Contig9031 - - 2e-4 At5g18270 ANAC087 C.G. S.X.
0.04 3e-2 38 Contig15667_at Contig15667 - - 2e+0 At3g58330 unknown protein C.G. S.X.
0.03 1e-1 36 Contig17974_at Contig17974 - - 2e-3 At2g24550 unknown protein C.G. S.X.
0.02 1e-1 36 Contig6734_at Contig6734 - - 4e+0 At3g20230 50S ribosomal protein L18 family C.G. S.X.
0.04 1e-1 36 Contig14512_at Contig14512 - - 2e-3 At5g28630 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-5 50 Arabidopsis thaliana At2g22080 816743 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:nucleus;MBOFPVA - - - C.G. S.X.
0.05 4e-4 46 Glycine max PsAffx.psHB041xG13f_s_at PsAffx.psHB041xG13f - - 4e+0 At1g10230 ASK18 (ARABIDOPSIS SKP1-LIKE 18) C.G. S.X.
0.23 4e-32 139 Oryza sativa Os03g0811800 AK063320.1 - Ribosomal protein L36 family protein 4e-3 At5g41570 WRKY24 C.G. S.X.
0.04 4e-4 46 Populus trichocarpa PtpAffx.214141.1.S1_at pmrna27514 hypothetical protein - 5e-3 At2g22080 unknown protein C.G. S.X.
0.71 7e-85 313 Triticum aestivum Ta.28258.1.S1_at CD935931 - - 4e-3 At4g15790 unknown protein C.G. S.X.
0.06 5e-3 40 Vitis vinifera 1621823_at CF214240 hypothetical protein LOC100253216 - 4e+0 At5g66000 unknown protein C.G. S.X.
0.29 6e-31 133 Zea mays Zm.3191.1.A1_at BM337305 ribosomal protein L36 containing protein - 2e+0 At5g41570 WRKY24 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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