Gene omics information

Query gene ID Contig8287_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.3Contig8287_atContig8287--4e-65At2g16440DNA replication licensing factor, putativeS.X.H.G.
0.6784.7Contig11434_atContig11434--3e-20At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)S.X.H.G.
0.6784.7Contig11436_atContig11436--5e-23At2g03270DNA-binding protein, putativeS.X.H.G.
0.4458.9Contig19970_atContig19970--5e+0At5g19800hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.2732.1Contig23462_atContig23462--5e+0At5g43770proline-rich family proteinS.X.H.G.
0.097.4Contig8279_atContig8279--7e-18At3g23990HSP60 (HEAT SHOCK PROTEIN 60)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.799.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
21.699.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
19.499.7GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
19.399.7GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
16.099.6GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
14.899.5GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
14.499.5GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
14.499.5GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
12.799.4GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
12.599.4GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.360843HU14M07u_s_atHU14M07u--1e+0At5g65050AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31)C.G.S.X.
0.360843HU14M07u_atHU14M07u--1e+0At5g65050AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31)C.G.S.X.
0.029e-342Contig6593_s_atContig6593--2e-54At2g07690minichromosome maintenance family protein / MCM family proteinC.G.S.X.
0.019e-342Contig11774_atContig11774--8e-87At5g46280DNA replication licensing factor, putativeC.G.S.X.
0.029e-342Contig6592_atContig6592--2e-35At2g07690minichromosome maintenance family protein / MCM family proteinC.G.S.X.
0.013e-240Contig7102_atContig7102--2e-73At5g44635minichromosome maintenance family protein / MCM family proteinC.G.S.X.
0.013e-240Contig20398_atContig20398--8e-3At2g42620MAX2 (MORE AXILLARY BRANCHES 2)C.G.S.X.
0.013e-240Contig14819_atContig14819--3e-30At4g02060PRL (PROLIFERA)C.G.S.X.
0.015e-136Contig26057_atContig26057--4e-1At1g48620HON5 (High Mobility Group Family A 5)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.354e-65250Arabidopsis thalianaAt2g16440816142DNA replication licensing factor, putativeF:nucleoside-triphosphatase activity, DNA-dependent ATPase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication initiation, DNA replication;C:nucleus, chloroplast;MOFPBAV---C.G.S.X.
0.181e-38163Glycine maxGmaAffx.37281.1.S1_atBM528181--2e-66At2g16440DNA replication licensing factor, putativeC.G.S.X.
0.6301802Oryza sativaOs.47996.1.A1_at---0C.G.S.X.
0.238e-27123Populus trichocarpaPtpAffx.34799.1.S1_atCK091729hypothetical protein-3e-48At2g16440DNA replication licensing factor, putativeC.G.S.X.
0.7901388Triticum aestivumTa.7366.1.S1_s_atCA611226--4e-37At2g16440DNA replication licensing factor, putativeC.G.S.X.
0.011e+034Vitis vinifera1622435_atCF206114.1hypothetical protein LOC100249381-1e-13At1g32130-C.G.S.X.
0.062e-1997Zea maysZmAffx.383.1.A1_atAI673962--2e-1At4g38370phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage