CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8273_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.69 85.5 Contig8273_at Contig8273 - - 2e+0 At5g03170 FLA11 S.X. H.G.
0.36 47.1 Contig104_x_at Contig104 - - 7e-2 At3g07230 wound-responsive protein-related S.X. H.G.
0.29 35.5 Contig12953_at Contig12953 - - 1e-4 At3g16980 NRPB9A S.X. H.G.
0.23 26.1 Contig9753_at Contig9753 - - 3e-46 At3g22880 DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) S.X. H.G.
0.17 16.9 Contig6962_at Contig6962 - - 1e-1 At5g19473 - S.X. H.G.
0.17 16.9 Contig1430_at Contig1430 - - 3e-54 At4g27960 UBC9 (UBIQUITIN CONJUGATING ENZYME 9) S.X. H.G.
0.16 15.3 HA11C13u_s_at HA11C13u - - 8e-4 At1g73230 nascent polypeptide-associated complex (NAC) domain-containing protein S.X. H.G.
0.15 14.1 Contig19526_at Contig19526 - - 7e-1 At4g32460 - S.X. H.G.
0.14 12.9 Contig17862_at Contig17862 - - 1e+0 At5g10550 GTE2 (Global transcription factor group E 2) S.X. H.G.
0.13 11.6 HVSMEn0005L15f_x_at HVSMEn0005L15f - - 9e+0 At5g50430 UBC33 (ubiquitin-conjugating enzyme 33) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.2 99.6 GSM261026 ABA-Early-rep3 GSE10328 ABA experiment
11.8 99.3 GSM261022 ABA-Control-rep2 GSE10328 ABA experiment
11.2 99.2 GSM261021 ABA-Control-rep1 GSE10328 ABA experiment
11.1 99.2 GSM146365 Maythorpe Root Control, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.0 99.2 GSM261023 ABA-Control-rep3 GSE10328 ABA experiment
10.8 99.2 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
9.9 99.1 GSM431570 pathogen isolates: Mock inoculated control - rep3 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
9.8 99.1 GSM261025 ABA-Early-rep2 GSE10328 ABA experiment
8.4 98.8 GSM431569 pathogen isolates: Mock inoculated control - rep2 GSE17240 Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
8.2 98.7 GSM261024 ABA-Early-rep1 GSE10328 ABA experiment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.46 3e-170 597 HVSMEf0014C12r2_s_at HVSMEf0014C12r2 - - 1e+1 At5g03840 TFL1 (TERMINAL FLOWER 1) C.G. S.X.
0.46 3e-170 597 HVSMEf0014C12r2_at HVSMEf0014C12r2 - - 1e+1 At5g03840 TFL1 (TERMINAL FLOWER 1) C.G. S.X.
0.31 2e-36 153 Contig7789_at Contig7789 - - 6e-4 At5g03170 FLA11 C.G. S.X.
0.03 7e-5 48 Contig10000_s_at Contig10000 - - 8e+0 At5g05113 unknown protein C.G. S.X.
0.03 7e-5 48 Contig10000_at Contig10000 - - 8e+0 At5g05113 unknown protein C.G. S.X.
0.03 3e-4 46 Contig15105_at Contig15105 - - 8e+0 At5g53030 unknown protein C.G. S.X.
0.04 4e-3 42 Contig6782_at Contig6782 - - 6e-1 At5g41660 unknown protein C.G. S.X.
0.02 7e-2 38 Contig12118_at Contig12118 - - 3e-1 At1g34419 unknown protein C.G. S.X.
0.03 3e-1 36 Contig18128_at Contig18128 - - 2e+0 At4g12730 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 34 Arabidopsis thaliana At5g03170 831914 FLA11 F:unknown;P:unknown;C:anchored to membrane;PBOMAF - - - C.G. S.X.
0.03 5e-2 40 Glycine max GmaAffx.93619.1.S1_s_at CF809344 - - 1e+0 At4g29410 60S ribosomal protein L28 (RPL28C) C.G. S.X.
0.49 7e-153 541 Oryza sativa Os01g0668100 AK105603.1 - Beta-Ig-H3/fasciclin domain containing protein 1e-1 At3g57500 unknown protein C.G. S.X.
0.03 2e-1 38 Populus trichocarpa PtpAffx.48242.1.S1_at CV255458 - - 5e-2 At4g22680 MYB85 (myb domain protein 85) C.G. S.X.
0.65 0 1168 Triticum aestivum Ta.1852.1.S1_at CA625220 - - 3e+0 At5g03170 FLA11 C.G. S.X.
0.03 6e-1 34 Vitis vinifera 1621455_at CF514637 hypothetical protein LOC100266483 - 1e+0 At5g60650 unknown protein C.G. S.X.
0.38 1e-89 329 Zea mays Zm.3283.2.A1_a_at BM335982 hypothetical protein LOC100192072 - 2e+0 At3g46110 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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