CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig8059_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 84.7 Contig8059_at Contig8059 - - 8e-18 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) S.X. H.G.
0.67 84.7 Contig8925_at Contig8925 - - 3e+0 At5g66060 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors S.X. H.G.
0.63 80.3 Contig13436_at Contig13436 - - 3e-1 At3g23200 unknown protein S.X. H.G.
0.63 80.3 Contig24772_at Contig24772 - - 1e-4 At5g63740 zinc finger protein-related S.X. H.G.
0.53 69.7 Contig6491_at Contig6491 - - 6e-1 At5g02230 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.52 68.3 Contig13168_at Contig13168 - - 3e+0 At5g50130 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.40 53.1 Contig23564_at Contig23564 - - 1e+0 At1g09932 phosphoglycerate/bisphosphoglycerate mutase-related S.X. H.G.
0.33 42.6 Contig7178_s_at Contig7178 - - 2e+0 At4g35900 FD S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.1 GSM215730 Control (DMSO) treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
3.2 94.3 GSM160822 38% SWC rep3 GSE6990 Barley drought stress
3.2 94.3 GSM215732 gibberellin plus Yariv-reagent treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
3.1 94.1 GSM215731 gibberellin treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
2.9 93.4 GSM261076 Albina e-16 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.8 93.1 GSM261024 ABA-Early-rep1 GSE10328 ABA experiment
2.8 93.1 GSM382234 Root_Hg3 GSE15295 Mercury toxicity in barley roots
2.8 93.1 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
2.7 92.7 GSM160819 38% SWC rep1 GSE6990 Barley drought stress
2.5 91.9 GSM261043 before 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-8 61 Contig13490_at Contig13490 - - 4e-10 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
0.03 5e-5 50 Contig13616_at Contig13616 - - 4e-23 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
0.01 8e-4 46 Contig1412_at Contig1412 - - 6e+0 At3g55770 LIM domain-containing protein C.G. S.X.
0.01 1e-2 42 Contig15378_at Contig15378 - - 8e-10 At1g06850 AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52) C.G. S.X.
0.01 5e-2 40 Contig5351_at Contig5351 - - 2e-1 At1g48450 unknown protein C.G. S.X.
0.01 2e-1 38 Contig13183_s_at Contig13183 - - 3e-37 At1g80670 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.01 2e-1 38 Contig13183_at Contig13183 - - 3e-37 At1g80670 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.01 2e-1 38 Contig11532_at Contig11532 - - 1e-22 At2g42960 protein kinase family protein C.G. S.X.
0.01 2e-1 38 Contig22199_at Contig22199 - - 9e-2 At1g09440 protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 8e-18 93 Arabidopsis thaliana At1g08720 837393 EDR1 (ENHANCED DISEASE RESISTANCE 1) enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum - - - C.G. S.X.
0.15 4e-14 81 Glycine max Gma.1617.1.S1_at BI968740 - - 6e-88 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
0.58 0 969 Oryza sativa Os10g0430900 AK121718.1 - Protein kinase domain containing protein 2e-28 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
0.18 2e-53 212 Populus trichocarpa PtpAffx.210967.1.S1_at pmrna21544 hypothetical protein - 2e-83 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
0.26 1e-100 369 Triticum aestivum Ta.26098.1.S1_a_at CD452625 EDR1 protein - 1e+0 At1g74590 GSTU10 (GLUTATHIONE S-TRANSFERASE TAU 10) C.G. S.X.
0.06 6e-13 75 Vitis vinifera 1611191_at CF207954 hypothetical protein LOC100264622 - 1e-60 At5g11850 protein kinase family protein C.G. S.X.
0.21 8e-118 424 Zea mays Zm.15631.1.S1_at CD437302 - - 1e-32 At1g08720 EDR1 (ENHANCED DISEASE RESISTANCE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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