Gene omics information

Query gene ID Contig8004_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7689.8Contig8004_atContig8004--2e-3At3g06390integral membrane family proteinS.X.H.G.
0.4661.0HVSMEg0017A14f_s_atHVSMEg0017A14f--5e-1At3g58150-S.X.H.G.
0.3647.1HP01E21w_s_atHP01E21w--2e-1At3g20340-S.X.H.G.
0.3342.6HVSMEb0011P05r2_x_atHVSMEb0011P05r2--3e+0At4g05130equilibrative nucleoside transporter, putative (ENT4)S.X.H.G.
0.3138.6Contig338_s_atContig338--2e-39At1g09200histone H3S.X.H.G.
0.2630.4Contig9647_atContig9647--2e-12At2g31530EMB2289 (EMBRYO DEFECTIVE 2289)S.X.H.G.
0.2528.9Contig4633_x_atContig4633--2e+0At5g42635glycine-rich proteinS.X.H.G.
0.2122.6HR01N15u_atHR01N15u--2e+0At2g31420DNA bindingS.X.H.G.
0.2122.6Contig18591_atContig18591--6e-1At5g42090-S.X.H.G.
0.2122.6Contig21087_atContig21087--5e+0At5g42630ATS (ABERRANT TESTA SHAPE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.899.9GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leaves
27.799.8GSM3634655 mM B(OH)3 treatment (5B) - rep3GSE14521Late response to boron toxicity in barley leaves
24.199.8GSM36346710 mM B(OH)3 treatment (10B) - rep2GSE14521Late response to boron toxicity in barley leaves
16.099.6GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
14.599.5GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
12.599.4GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.799.3GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
11.199.2GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
9.899.1GSM382237Root_Control3GSE15295Mercury toxicity in barley roots
8.998.9GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-240Contig17909_atContig17909--5e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.032e-136HVSMEf0002B02r2_atHVSMEf0002B02r2--4e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.022e-136baak1b18_x_atbaak1b18--4e-22At2g34420LHB1B2C.G.S.X.
0.022e-136baak1b18_atbaak1b18--4e-22At2g34420LHB1B2C.G.S.X.
0.022e-136Contig951_atContig951--2e-33At2g34420LHB1B2C.G.S.X.
0.022e-136Contig828_s_atContig828--1e-26At2g34430LHB1B1C.G.S.X.
0.038e-134Contig5416_s_atContig5416--9e-1At1g51140basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.038e-134Contig5415_atContig5415--1e+0At1g51140basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.028e-134Contig3807_atContig3807--7e-9At4g22220ISU1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-344Arabidopsis thalianaAt3g06390819813integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.036e-446Glycine maxGmaAffx.79007.1.S1_atBU761409--1e+0At2g04900unknown proteinC.G.S.X.
0.254e-58226Oryza sativaOs07g0442900AK073296.1-Plant integral membrane protein family protein5e-1At3g06390integral membrane family proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.221451.1.S1_atpmrna38346--6e-1At1g70910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.810958Triticum aestivumTa.25140.1.S1_atCD866293--1e-1At3g06390integral membrane family proteinC.G.S.X.
0.038e+030Vitis vinifera1617732_atCF210335hypothetical protein LOC100262164-1e+0At2g47530-C.G.S.X.
0.143e-1271Zea maysZm.9689.1.A1_atBM335695plant integral membrane protein TIGR01569 containing protein-1e+0At3g43153cAMP-dependent protein kinase inhibitor-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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