CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig7987_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 86.0 Contig7987_at Contig7987 - - 3e-15 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.71 87.1 Contig9559_at Contig9559 - - 2e-5 At3g13320 CAX2 (CATION EXCHANGER 2) S.X. H.G.
0.63 80.3 Contig11680_at Contig11680 - - 2e-3 At1g74660 MIF1 (MINI ZINC FINGER 1) S.X. H.G.
0.56 74.3 Contig10891_s_at Contig10891 - - 7e-1 At3g50695 unknown protein S.X. H.G.
0.53 69.7 Contig16415_at Contig16415 - - 4e-12 At1g08630 THA1 (Threonine Aldolase 1) S.X. H.G.
0.52 68.3 Contig10690_at Contig10690 - - 2e-5 At2g35530 bZIP transcription factor family protein S.X. H.G.
0.50 66.9 Contig13528_at Contig13528 - - 9e-9 At1g29690 CAD1 (constitutively activated cell death 1) S.X. H.G.
0.48 63.2 Contig10050_s_at Contig10050 - - 5e-2 At2g25052 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.2 99.4 GSM160744 drought control rep2 GSE6990 Barley drought stress
10.7 99.2 GSM261032 Dicktoo control-rep3 GSE10329 Low temperature stress in cv. Dicktoo
10.0 99.1 GSM160815 drought control rep3 GSE6990 Barley drought stress
9.3 99.0 GSM261030 Dicktoo-control-rep1 GSE10329 Low temperature stress in cv. Dicktoo
8.3 98.8 GSM261040 Dicktoo-deacclimation-rep2 GSE10329 Low temperature stress in cv. Dicktoo
7.8 98.6 GSM372940 genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.9 98.3 GSM281747 Genotype: Steptoe - rep3 GSE11182 Steptoe x Morex seedling leaf comparison
6.8 98.3 GSM261041 Dicktoo-deacclimation-rep3 GSE10329 Low temperature stress in cv. Dicktoo
6.3 98.1 GSM281750 Genotype: Morex - rep3 GSE11182 Steptoe x Morex seedling leaf comparison
6.3 98.1 GSM261036 Dicktoo-subzero-rep1 GSE10329 Low temperature stress in cv. Dicktoo
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 3e-26 119 Contig4938_s_at Contig4938 - - 8e-47 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.10 3e-17 89 Contig1934_at Contig1934 - - 7e-13 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.01 3e-1 36 Contig5584_at Contig5584 - - 8e-4 At3g20000 TOM40 C.G. S.X.
0.01 3e-1 36 Contig8722_at Contig8722 - - 3e-3 At4g23500 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
0.01 1e+0 34 Contig1846_s_at Contig1846 - - 9e-29 At4g35090 CAT2 (CATALASE 2) C.G. S.X.
0.02 1e+0 34 HVSMEm0008L09r2_at HVSMEm0008L09r2 - - 3e+0 At4g23670 major latex protein-related / MLP-related C.G. S.X.
0.01 1e+0 34 Contig16483_at Contig16483 - - 8e-3 At4g39640 GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1) C.G. S.X.
0.01 1e+0 34 Contig16321_at Contig16321 - - 1e-2 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.01 1e+0 34 Contig2281_at Contig2281 - - 1e+1 At4g01516 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 3e-15 83 Arabidopsis thaliana At1g67280 843048 lactoylglutathione lyase, putative / glyoxalase I, putative F:lactoylglutathione lyase activity, metal ion binding;P:response to cold, carbohydrate metabolic process;C:thylakoid, thylakoid lumen, stromule, chloroplast, chloroplast stroma;BOMFPA - - - C.G. S.X.
0.07 4e-3 44 Glycine max Gma.5683.2.S1_at CA935387 - - 7e-75 At1g11840 ATGLX1 (GLYOXALASE I HOMOLOG) C.G. S.X.
0.40 1e-117 424 Oryza sativa Os02g0280500 AK058486.1 - Glyoxalase I 1e-10 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.24 4e-31 137 Populus trichocarpa Ptp.1178.1.A1_at CV265898 hypothetical protein - 2e-71 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.85 0 1602 Triticum aestivum Ta.8554.1.S1_at BQ162050 Lgul protein - 1e-11 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.18 9e-13 73 Vitis vinifera 1609873_at CB341501 hypothetical protein LOC100247523 - 2e-69 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
0.24 3e-38 159 Zea mays Zm.17590.1.A1_at CK144918 hypothetical protein LOC100191237 - 3e-46 At1g67280 lactoylglutathione lyase, putative / glyoxalase I, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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