Gene omics information

Query gene ID Contig7886_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig7886_atContig7886--8e+0At5g397905'-AMP-activated protein kinase beta-1 subunit-relatedS.X.H.G.
0.6077.3Contig5960_atContig5960--1e-16At3g18880ribosomal protein S17 family proteinS.X.H.G.
0.4762.2Contig17036_atContig17036--4e-7At3g27720zinc finger protein-relatedS.X.H.G.
0.4661.0Contig11980_atContig11980--3e-2At3g57920SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15)S.X.H.G.
0.3342.6Contig6981_atContig6981--4e-5At4g00170vesicle-associated membrane family protein / VAMP family proteinS.X.H.G.
0.3037.0Contig10592_atContig10592--1e-2At5g26180NOL1/NOP2/sun family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
286.6100.0GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatment
64.5100.0GSM130804JA, biological rep2GSE5605Expression data from barley under salinity stress and JA treatment
9.198.9GSM281749Genotype: Morex - rep2GSE11182Steptoe x Morex seedling leaf comparison
3.595.1GSM281745Genotype: Steptoe - rep1GSE11182Steptoe x Morex seedling leaf comparison
3.595.1GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatment
3.294.3GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
2.390.9GSM281750Genotype: Morex - rep3GSE11182Steptoe x Morex seedling leaf comparison
2.290.3GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
1.887.4GSM688913 h control replicate 3GSE3097Barley1 salinity stress study
1.887.4GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8701580Contig7887_atContig7887--2e+0At5g66640DAR3 (DA1-RELATED PROTEIN 3)C.G.S.X.
0.022e-136Contig11584_atContig11584--5e-1At5g25070unknown proteinC.G.S.X.
0.019e-134Contig4158_atContig4158--8e-63At1g60780HAP13 (HAPLESS 13)C.G.S.X.
0.019e-134Contig16123_atContig16123--2e-1At5g07130LAC13 (laccase 13)C.G.S.X.
0.014e+032Contig5706_atContig5706cellulose synthase-like CslF6-8e-2At5g11600unknown proteinC.G.S.X.
0.014e+032Contig11518_atContig11518--5e-9At1g63500ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.024e+032HVSMEa0011L07r2_atHVSMEa0011L07r2--1e+1At5g37270zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.014e+032Contig21135_atContig21135--2e+0At2g10340unknown proteinC.G.S.X.
0.024e+032Contig16311_atContig16311--5e+0At5g18920unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e+032Arabidopsis thalianaAt5g397908339755'-AMP-activated protein kinase beta-1 subunit-relatedEncodes a chloroplast localized protein with starch binding activity that may be involved in carbohydrate metabolism.---C.G.S.X.
0.027e-136Glycine maxGma.6732.2.S1_atAW351239--6e+0At5g49850jacalin lectin family proteinC.G.S.X.
0.153e-757Oryza sativaOs12g0228700BX900947-Beta-glucosidase aggregating factor7e-2At5g07380unknown proteinC.G.S.X.
0.037e-136Populus trichocarpaPtpAffx.4227.1.S1_atCV263321hypothetical protein-5e-1At3g59870unknown proteinC.G.S.X.
0.730777Triticum aestivumTa.25479.1.S1_atCA645926--2e+0At5g07640zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e-136Vitis vinifera1618561_atCF204500.1hypothetical protein LOC100246875-2e-5At3g03980short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.166e-857Zea maysZm.4999.1.S1_atAI600285--7e-1At5g04047-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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