CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig7195_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 98.4 Contig7195_at Contig7195 - - 5e-1 At5g41210 ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) S.X. H.G.
0.44 58.9 EBem09_SQ007_G10_at EBem09_SQ007_G10 - - 6e+0 At2g27310 F-box family protein S.X. H.G.
0.36 47.1 Contig3346_at Contig3346 - - 6e-2 At2g29850 unknown protein S.X. H.G.
0.35 45.1 Contig9570_s_at Contig9570 - - 1e+0 At5g57080 unknown protein S.X. H.G.
0.12 10.4 Contig2165_at Contig2165 - - 9e-35 At4g13930 SHM4 (serine hydroxymethyltransferase 4) S.X. H.G.
0.08 6.5 HA18O08r_s_at HA18O08r - - 4e-6 At4g26530 fructose-bisphosphate aldolase, putative S.X. H.G.
0.04 3.4 Contig6493_at Contig6493 - - 6e-2 At4g31080 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.4 98.1 GSM363465 5 mM B(OH)3 treatment (5B) - rep3 GSE14521 Late response to boron toxicity in barley leaves
6.0 97.9 GSM372957 genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5 97.6 GSM372959 genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.4 97.5 GSM311259 kara_with_aphids_1 GSE12584 Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
5.0 97.2 GSM382237 Root_Control3 GSE15295 Mercury toxicity in barley roots
4.9 97.1 GSM431549 pathogen isolates: Polymyxa graminis - rep1 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.9 97.1 GSM363467 10 mM B(OH)3 treatment (10B) - rep2 GSE14521 Late response to boron toxicity in barley leaves
4.7 96.9 GSM372943 genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.7 96.9 GSM311260 kara_with_aphids_2 GSE12584 Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.7 96.9 GSM431547 pathogen isolates: Mock - rep2 GSE17238 Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-1 36 Contig5362_at Contig5362 - - 3e-50 At3g19820 DWF1 (DWARF 1) C.G. S.X.
0.02 9e-1 34 Contig4769_at Contig4769 - - 3e-5 At2g32520 dienelactone hydrolase family protein C.G. S.X.
0.01 9e-1 34 Contig10397_at Contig10397 - - 1e-2 At5g42560 abscisic acid-responsive HVA22 family protein C.G. S.X.
0.02 9e-1 34 Contig15220_at Contig15220 - - 5e-1 At1g43010 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 9e-1 34 Contig15046_s_at Contig15046 - - 6e-1 At3g45110 unknown protein C.G. S.X.
0.01 9e-1 34 Contig12768_at Contig12768 - - 2e-13 At5g67130 phospholipase C/ phosphoric diester hydrolase C.G. S.X.
0.01 9e-1 34 Contig12233_at Contig12233 - - 1e-2 At3g24050 GATA transcription factor 1 (GATA-1) C.G. S.X.
0.01 9e-1 34 Contig11176_at Contig11176 - - 3e-6 At2g25670 unknown protein C.G. S.X.
0.01 9e-1 34 Contig10926_at Contig10926 - - 3e-6 At3g26790 FUS3 (FUSCA 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-1 36 Arabidopsis thaliana At5g41210 834123 ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). - - - C.G. S.X.
0.03 1e-2 42 Glycine max HgAffx.9307.1.S1_at CB379194 - - 8e-3 At5g04045 Expressed protein C.G. S.X.
0.37 5e-27 123 Oryza sativa Os11g0588300 AF402793.1 - Glutathione transferase AtGST 10 (EC 2.5.1.18) 2e-3 At5g41210 ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) C.G. S.X.
0.04 7e-1 36 Populus trichocarpa PtpAffx.31307.1.A1_s_at CV240581 hypothetical protein - 8e+0 Atcg00800 - C.G. S.X.
0.64 0 823 Triticum aestivum Ta.2397.1.S1_at BJ282385 - - 3e-2 At5g41220 ATGSTT3 (GLUTATHIONE S-TRANSFERASE THETA 3) C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1611262_at CD013610 hypothetical protein LOC100244343 - 1e+0 At3g24010 ING1 (INHIBITOR OF GROWTH 1) C.G. S.X.
0.30 2e-26 119 Zea mays Zm.6963.1.A1_at BG842780 glutathione S-transferase theta-1 - 2e-3 At5g41220 ATGSTT3 (GLUTATHIONE S-TRANSFERASE THETA 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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