CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig6995_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 78.7 Contig6995_at Contig6995 - - 2e-8 At5g57270 unknown protein S.X. H.G.
0.91 98.1 Contig4175_at Contig4175 - - 1e-19 At3g07100 protein transport protein Sec24, putative S.X. H.G.
0.80 92.5 Contig4760_s_at Contig4760 - - 1e+0 At4g38700 disease resistance-responsive family protein S.X. H.G.
0.73 88.7 Contig5297_at Contig5297 - - 4e-16 At1g64550 ATGCN3 S.X. H.G.
0.71 87.1 Contig11464_at Contig11464 - - 6e-20 At1g55740 AtSIP1 (Arabidopsis thaliana seed imbibition 1) S.X. H.G.
0.67 84.7 Contig5117_at Contig5117 - - 8e-2 At5g60500 undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
63.4 100.0 GSM215729 gibberellin plus Yariv-reagent treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
47.5 99.9 GSM215732 gibberellin plus Yariv-reagent treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
15.7 99.6 GSM215728 gibberellin treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
11.5 99.3 GSM215727 Control (DMSO) treatment rep1 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
6.0 97.9 GSM382235 Root_Control1 GSE15295 Mercury toxicity in barley roots
5.3 97.4 GSM372981 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0 97.2 GSM382232 Root_Hg1 GSE15295 Mercury toxicity in barley roots
4.3 96.4 GSM372984 genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5 95.1 GSM215731 gibberellin treatment rep2 GSE8712 The effects of Yariv-reagent on barley aleurone GA signaling
3.2 94.3 GSM372982 genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3 GSE14930 Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e-1 38 Contig7691_at Contig7691 pathogen induced protein 2-4 - 4e-2 At2g21620 RD2 C.G. S.X.
0.01 2e+0 34 Contig14193_at Contig14193 - - 2e-3 At1g19480 HhH-GPD base excision DNA repair family protein C.G. S.X.
0.01 7e+0 32 Contig7231_at Contig7231 - - 3e+0 At5g26840 unknown protein C.G. S.X.
0.01 7e+0 32 HD05L07r_at HD05L07r - - 3e-1 At2g35270 DNA-binding protein-related C.G. S.X.
0.01 7e+0 32 Contig4766_at Contig4766 - - 5e-11 At2g14170 ALDH6B2 C.G. S.X.
0.01 7e+0 32 Contig803_x_at Contig803 - - 9e-79 At1g50010 TUA2 C.G. S.X.
0.01 7e+0 32 Contig19352_at Contig19352 - - 1e-1 At5g41570 WRKY24 C.G. S.X.
0.01 7e+0 32 Contig127_s_at Contig127 - - 1e-74 At1g50010 TUA2 C.G. S.X.
0.01 7e+0 32 Contig8722_at Contig8722 - - 3e-3 At4g23500 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-8 61 Arabidopsis thaliana At5g57270 835832 unknown protein F:unknown;P:unknown;C:unknown;POB - - - C.G. S.X.
0.08 9e-2 40 Glycine max GmaAffx.62043.2.S1_at BI316761 - - 5e-4 At4g30060 unknown protein C.G. S.X.
0.45 5e-158 559 Oryza sativa Os02g0175500 AK067170.1 - Arabidopsis protein of unknown function DUF266family protein 7e-11 At4g25870 unknown protein C.G. S.X.
0.09 1e-3 46 Populus trichocarpa PtpAffx.147997.1.S1_a_at BU875360 hypothetical protein - 1e-14 At2g19160 unknown protein C.G. S.X.
0.56 0 1057 Triticum aestivum Ta.10262.1.A1_a_at BQ170076 - - 1e-1 At4g30060 unknown protein C.G. S.X.
0.01 4e+0 32 Vitis vinifera 1622423_at CB342360 similar to Bifunctional nitrilase/nitrile hydratase NIT4B - 1e-13 At5g22300 NIT4 (NITRILASE 4) C.G. S.X.
0.35 3e-128 458 Zea mays Zm.19122.1.A1_a_at AY106981.1 hypothetical protein LOC100275724 - 3e-5 At5g57270 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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