Gene omics information

Query gene ID Contig6817_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7086.0Contig6817_atContig6817--2e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)S.X.H.G.
0.3138.6Contig6124_atContig6124--5e-2At5g58490cinnamoyl-CoA reductase familyS.X.H.G.
0.2935.5Contig7088_atContig7088alpha-amylase type A, EC 3.2.1.1-5e-2At4g25000AMY1 (ALPHA-AMYLASE-LIKE)S.X.H.G.
0.2528.9HVSMEl0008B06r2_atHVSMEl0008B06r2--4e+0At1g53635unknown proteinS.X.H.G.
0.2528.9Contig11659_atContig11659--5e-2At5g32440-S.X.H.G.
0.2326.1Contig11797_atContig11797--1e+1At4g21216unknown proteinS.X.H.G.
0.2021.1Contig15882_s_atContig15882--3e-1At5g07220ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3)S.X.H.G.
0.1716.9Contig12507_atContig12507--2e-4At3g01930nodulin family proteinS.X.H.G.
0.119.4Contig397_x_atContig397--0At1g07920elongation factor 1-alpha / EF-1-alphaS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.698.8GSM261031Dicktoo-control-rep2GSE10329Low temperature stress in cv. Dicktoo
7.798.6GSM261039Dicktoo-deacclimation-rep1GSE10329Low temperature stress in cv. Dicktoo
7.598.6GSM160815drought control rep3GSE6990Barley drought stress
7.598.6GSM161200cold treatment rep1GSE6993Barley low temperature stress
6.898.3GSM160744drought control rep2GSE6990Barley drought stress
6.898.3GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
6.097.9GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
5.997.9GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.897.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.897.8GSM281747Genotype: Steptoe - rep3GSE11182Steptoe x Morex seedling leaf comparison
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-446Contig7939_atContig7939--2e-34At4g25550protein bindingC.G.S.X.
0.042e-446Contig17523_atContig17523--7e-2At4g08230glycine-rich proteinC.G.S.X.
0.032e-446Contig6064_atContig6064--5e-16At5g50870UBC27 (ubiquitin-conjugating enzyme 27)C.G.S.X.
0.042e-446Contig26028_atContig26028--5e-3At2g01340unknown proteinC.G.S.X.
0.042e-446Contig22184_atContig22184--5e+0At5g56070unknown proteinC.G.S.X.
0.032e-446Contig9163_atContig9163--2e-6At1g03680ATHM1C.G.S.X.
0.026e-444Contig6578_atContig6578--1e-27At1g64650-C.G.S.X.
0.043e-342Contig1481_x_atContig1481--1e-5At4g19003VPS25C.G.S.X.
0.043e-342Contig1481_atContig1481--1e-5At4g19003VPS25C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-240Arabidopsis thalianaAt3g56910824858PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope;PM---C.G.S.X.
0.097e-342Glycine maxGma.15777.1.A1_atCD417082--1e-9At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.274e-42173Oryza sativaOs01g0278900AK120429.1-Hypothetical protein3e-7At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.077e-652Populus trichocarpaPtp.3375.1.S1_atCV281370hypothetical protein-7e-6At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.727e-101367Triticum aestivumTa.7966.1.S1_a_atBJ225931--4e-3At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.093e-548Vitis vinifera1607287_a_atCA817984hypothetical protein LOC100248273-3e-16At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.264e-45180Zea maysZm.16299.2.A1_a_atBM33625050S ribosomal protein L40-7e-2At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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