Gene omics information

Query gene ID	Contig6633_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig6633_at	Contig6633	-	-	4e+0	At4g17310	unknown protein	S.X.	H.G.	Please select
0.91	98.1	Contig6634_at	Contig6634	-	-	9e-4	At3g09470	-	S.X.	H.G.	Please select
0.80	92.5	Contig6632_s_at	Contig6632	-	-	2e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.44	58.9	Contig11836_at	Contig11836	-	-	6e-10	At1g22650	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	S.X.	H.G.	Please select
0.33	42.6	Contig2490_at	Contig2490	-	-	1e-6	At1g62660	beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar	S.X.	H.G.	Please select
0.21	22.6	Contig6587_s_at	Contig6587	-	-	1e-4	At3g52470	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.9	99.2	GSM372942	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.7	99.2	GSM372960	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.2	98.7	GSM372943	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.8	98.6	GSM372941	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.8	98.6	GSM372973	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.8	98.6	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.4	98.5	GSM372972	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.3	98.5	GSM372969	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.7	98.3	GSM372978	genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.2	98.0	GSM372959	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	2e-96	351	Contig6632_s_at	Contig6632	-	-	2e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.47	2e-96	351	Contig6632_at	Contig6632	-	-	2e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.08	1e-7	56	Contig14842_at	Contig14842	-	-	2e+0	Atmg01350	-	C.G.	S.X.	Please select
0.05	4e-5	48	Contig9939_at	Contig9939	-	-	2e+0	At4g17670	senescence-associated protein-related	C.G.	S.X.	Please select
0.03	1e-4	46	Contig17204_at	Contig17204	-	-	6e+0	At5g53030	unknown protein	C.G.	S.X.	Please select
0.02	6e-4	44	Contig5241_at	Contig5241	-	-	8e-2	At5g08790	ATAF2	C.G.	S.X.	Please select
0.01	2e-3	42	Contig5347_at	Contig5347	-	-	1e-3	At1g17770	SUVH7 (SU(VAR)3-9 HOMOLOG 7)	C.G.	S.X.	Please select
0.03	9e-3	40	Contig21706_at	Contig21706	-	-	1e-3	At5g44000	glutathione S-transferase C-terminal domain-containing protein	C.G.	S.X.	Please select
0.02	9e-3	40	Contig10207_s_at	Contig10207	-	-	4e-5	At3g50980	XERO1 (DEHYDRIN XERO 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e+0	32	Arabidopsis thaliana	At4g17310	827444	unknown protein	F:unknown;P:unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	2e+0	34	Glycine max	PsAffx.psMY007iE09r_s_at	PsAffx.psMY007iE09r	-	-	3e+0	At4g24590	unknown protein	C.G.	S.X.	Please select
0.26	1e-38	161	Oryza sativa	Os09g0367900	AK063310.1	-	Hypothetical protein	9e-2	At4g27810	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	6e+0	32	Populus trichocarpa	PtpAffx.212524.1.S1_s_at	pmrna24528	-	-	2e-23	At4g27585	band 7 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.51	2e-61	236	Triticum aestivum	Ta.1379.2.S1_at	BG907121	-	-	2e-3	At5g37200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	9e-2	36	Vitis vinifera	1609442_at	CF373210	hypothetical protein LOC100243127	-	3e-4	At3g05800	transcription factor	C.G.	S.X.	Please select
0.04	2e-3	42	Zea mays	Zm.17352.1.A1_at	CF636500	-	-	4e+0	At5g53030	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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