Gene omics information

Query gene ID Contig6604_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig6604_s_atContig6604--1e-4At1g18100E12A11S.X.H.G.
0.5066.9Contig5213_atContig5213--2e-11At5g61020ECT3S.X.H.G.
0.4762.2Contig4193_atContig4193--1e-5At5g58970ATUCP2 (UNCOUPLING PROTEIN 2)S.X.H.G.
0.4356.4Contig336_atContig336--4e-1At5g66580unknown proteinS.X.H.G.
0.4053.1Contig8442_atContig8442--5e-24At1g34470permease-relatedS.X.H.G.
0.3849.5Contig333_3_x_atContig333_3--0S.X.H.G.
0.3545.1Contig8857_atContig8857--4e-1At2g3760060S ribosomal protein L36 (RPL36A)S.X.H.G.
0.3342.6Contig1353_s_atContig1353--1e-1At4g11300unknown proteinS.X.H.G.
0.3240.3Contig15062_atContig15062--1e-1At4g25440ZFWD1 (zinc finger WD40 repeat protein 1)S.X.H.G.
0.3240.3Contig3470_atContig3470--1e-11At2g37340RSZ33S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.7100.0GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
36.399.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
34.299.9GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
34.199.9GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
30.599.9GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
26.399.8GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
25.299.8GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
13.499.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.799.2GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.699.2GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801606Contig6604_atContig6604--1e-4At1g18100E12A11C.G.S.X.
0.243e-37155Contig5005_atContig5005--3e-5At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.055e-238Contig26350_atContig26350--2e+0At2g27550ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)C.G.S.X.
0.022e-136Contig13490_atContig13490--4e-10At1g08720EDR1 (ENHANCED DISEASE RESISTANCE 1)C.G.S.X.
0.032e-136Contig11557_atContig11557--2e+0At5g27860unknown proteinC.G.S.X.
0.038e-134EBro08_SQ005_L04_atEBro08_SQ005_L04--3e+0At3g20910NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9)C.G.S.X.
0.028e-134Contig12580_atContig12580--1e+0At5g28640AN3 (ANGUSTIFOLIA 3)C.G.S.X.
0.018e-134Contig7098_atContig7098--1e-2At1g56360PAP6 (PURPLE ACID PHOSPHATASE 6)C.G.S.X.
0.018e-134Contig12449_atContig12449--3e-10At2g16400BLH7 (bell1-like homeodomain 7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-448Arabidopsis thalianaAt1g18100838390E12A11E12A11 protein (E12A11)---C.G.S.X.
0.102e-448Glycine maxGma.6921.1.S1_atBE823209--4e-4At1g18100E12A11C.G.S.X.
0.416e-42173Oryza sativaOs06g0498800AK107056.1-MOTHER of FT and TF1 protein4e-1At1g18100E12A11C.G.S.X.
0.106e-136Populus trichocarpaPtp.3985.1.S1_atAB181241.1hypothetical protein-2e-5At1g18100E12A11C.G.S.X.
0.640827Triticum aestivumTa.10074.1.S1_atBJ243068--4e-4At1g18100E12A11C.G.S.X.
0.035e-134Vitis vinifera1612551_atCF605967hypothetical protein LOC100251825-4e+0At3g19650cyclin-relatedC.G.S.X.
0.412e-44178Zea maysZm.15564.1.A1_atCD446261ZCN11 protein-5e-1At1g18100E12A11C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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