Gene omics information

Query gene ID Contig6576_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig6576_atContig6576--6e-6At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.4762.2Contig3772_atContig3772--1e-1At3g16240DELTA-TIPS.X.H.G.
0.3647.1Contig8241_atContig8241--1e+0At4g19390-S.X.H.G.
0.3545.1Contig6767_s_atContig6767--2e-11At1g13640phosphatidylinositol 3- and 4-kinase family proteinS.X.H.G.
0.3342.6Contig12257_atContig12257--2e-34At5g51070ERD1 (EARLY RESPONSIVE TO DEHYDRATION 1)S.X.H.G.
0.3342.6HM02H15u_s_atHM02H15u--5e+0At2g16030methyltransferaseS.X.H.G.
0.3342.6Contig5351_atContig5351--2e-1At1g48450unknown proteinS.X.H.G.
0.2935.5Contig3024_atContig3024--3e+0At3g13310DNAJ heat shock N-terminal domain-containing proteinS.X.H.G.
0.2835.5Contig8826_atContig8826--4e+0At3g58830haloacid dehalogenase (HAD) superfamily proteinS.X.H.G.
0.2732.1Contig3559_atContig3559--1e-86At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.199.7GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
20.399.7GSM398261HS41-1_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
13.799.5GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.199.4GSM398262HS41-1_0d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.898.3GSM398265HS41-1_1d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.398.1GSM398264HS41-1_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.198.0GSM372970genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.997.9GSM398272HS41-1_5d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.997.9GSM372952genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.997.9GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801354Contig6576_s_atContig6576--6e-6At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.597e-112402HV_CEa0012K03r2_x_atHV_CEa0012K03r2--3e+0At2g07215unknown proteinC.G.S.X.
0.313e-46184Contig2550_x_atContig2550pathogenesis-related protein 4-4e-4At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.333e-43174Contig2546_atContig2546--6e+0At5g37250zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.209e-22103HT05L06u_x_atHT05L06u--3e+0At4g00525unknown proteinC.G.S.X.
0.071e-550HT07J20u_x_atHT07J20u--8e+0At4g12617unknown proteinC.G.S.X.
0.024e-238Contig16415_atContig16415--4e-12At1g08630THA1 (Threonine Aldolase 1)C.G.S.X.
0.022e-136Contig5322_atContig5322--4e-1At5g37550unknown proteinC.G.S.X.
0.022e-136Contig25079_atContig25079--1e-1At4g14870P-P-bond-hydrolysis-driven protein transmembrane transporterC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.086e-652Arabidopsis thalianaAt3g04720819632PR4 (PATHOGENESIS-RELATED 4)Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.---C.G.S.X.
0.035e-136Glycine maxPsAffx.psMC003xD22f_s_atPsAffx.psMC003xD22f--3e+0At5g22080DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.316e-35149Oryza sativaOs11g0592000AK121059.1-Barwin7e-3At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.051e-138Populus trichocarpaPtp.2463.3.S1_atCK092991--2e+1At5g29000myb family transcription factorC.G.S.X.
0.705e-145513Triticum aestivumTaAffx.116570.1.S1_x_atAL825027--2e-8At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
0.046e+030Vitis vinifera1615451_atCF211155--2e-2At1g64030serpin family protein / serine protease inhibitor family proteinC.G.S.X.
0.447e-53206Zea maysZm.2227.1.A1_atBM381059hypothetical protein LOC100191593-6e-3At3g04720PR4 (PATHOGENESIS-RELATED 4)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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