Gene omics information

Query gene ID Contig6526_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig6526_atContig6526--7e-1At5g11550bindingS.X.H.G.
0.5774.9Contig7192_atContig7192--2e-8At4g38600KAK (KAKTUS)S.X.H.G.
0.4661.0Contig21968_atContig21968--2e+1At5g66490unknown proteinS.X.H.G.
0.2935.5Contig17563_atContig17563--2e+0At4g01915unknown proteinS.X.H.G.
0.2326.1HB32E08r_atHB32E08r--7e-1At3g15370ATEXPA12 (ARABIDOPSIS THALIANA EXPANSIN 12)S.X.H.G.
0.1210.4Contig22044_atContig22044--2e-39At2g36170ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.998.7GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.898.6GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.398.5GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.298.5GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.998.3GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.898.3GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.398.1GSM261063Xantha s-46 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.198.0GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.198.0GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.198.0GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.072e-1893Contig2481_s_atContig2481--8e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.032e-859Contig2471_atContig2471--1e-1At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.011e-344Contig7560_atContig7560--5e-53At2g39930ISA1 (ISOAMYLASE 1)C.G.S.X.
0.031e-344Contig8357_atContig8357--5e-1At5g14410unknown proteinC.G.S.X.
0.025e-342Contig5322_atContig5322--4e-1At5g37550unknown proteinC.G.S.X.
0.025e-342Contig11096_atContig11096--1e-2At1g03770RING1B (RING 1B)C.G.S.X.
0.025e-342Contig6409_atContig6409--1e-11At1g68530KCS6 (3-KETOACYL-COA SYNTHASE 6)C.G.S.X.
0.025e-342Contig5322_s_atContig5322--4e-1At5g37550unknown proteinC.G.S.X.
0.025e-342Contig2402_s_atContig2402--2e-13At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.037e-136Arabidopsis thalianaAt5g11550831027bindingF:binding;P:biological_process unknown;C:chloroplast;PMFOBV---C.G.S.X.
0.087e-859Glycine maxGmaAffx.93436.1.A1_s_atCF809161--4e-13At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.331e-37159Oryza sativaOs03g0183300AK058349.1-Pathogenesis-related transcriptional factor andERF domain containing protein4e+0At5g46873-C.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.207593.1.S1_atpmrna15069hypothetical protein-2e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)C.G.S.X.
0.653e-83309Triticum aestivumTa.10130.1.S1_atCK198845--8e-1At2g40220ABI4 (ABA INSENSITIVE 4)C.G.S.X.
0.032e-136Vitis vinifera1619140_atCF606031hypothetical protein LOC100246049-4e-4At2g35270DNA-binding protein-relatedC.G.S.X.
0.152e-33143Zea maysZm.19276.1.A1_atCO520926ethylene-responsive element binding protein 2-2e+1At4g15510photosystem II reaction center PsbP family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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