Gene omics information

Query gene ID Contig6525_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.2326.1Contig6525_atContig6525--1e-3At5g62640proline-rich family proteinS.X.H.G.
0.2427.2S0001000055P18F1_s_atS0001000055P18F1--6e+0At4g28310unknown proteinS.X.H.G.
0.1919.6Contig15960_atContig15960--3e-2At4g03180unknown proteinS.X.H.G.
0.086.5Contig24887_atContig24887--1e+0At4g35650isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeS.X.H.G.
0.032.6Contig2163_atContig2163--3e-1At2g04046-S.X.H.G.
0.032.6Contig9920_atContig9920--7e-1At3g15095unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.198.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.496.6GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.396.4GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
3.795.5GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.595.1GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.394.6GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.394.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.294.3GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.294.3GSM71144OWB-R stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-240Contig21945_atContig21945--4e+0At2g23960defense-related protein, putativeC.G.S.X.
0.013e-240Contig5301_atContig5301--1e-43At4g38130HD1 (HISTONE DEACETYLASE 1)C.G.S.X.
0.013e-240Contig15378_atContig15378--8e-10At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)C.G.S.X.
0.013e-240Contig12775_atContig12775--1e+0At3g63490ribosomal protein L1 family proteinC.G.S.X.
0.011e-138Contig8642_atContig8642--3e-3At3g04730IAA16C.G.S.X.
0.011e-138HV01H01w_atHV01H01w--1e+0At3g20890RNA binding / nucleic acid binding / nucleotide bindingC.G.S.X.
0.011e-138Contig2465_atContig2465--1e-135At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismC.G.S.X.
0.021e-138HM03M17u_atHM03M17u--4e-3At2g36100integral membrane family proteinC.G.S.X.
0.011e-138Contig14940_atContig14940--2e-1At3g15750unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-346Arabidopsis thalianaAt5g62640836385proline-rich family proteinnuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC---C.G.S.X.
0.063e-1791Glycine maxGma.4413.1.S1_atCD403009--9e-14At5g62640proline-rich family proteinC.G.S.X.
0.222e-49198Oryza sativaOs.9419.1.S1_at---0C.G.S.X.
0.056e-963Populus trichocarpaPtpAffx.157213.1.S1_atCV257441hypothetical protein-2e-6At5g62640proline-rich family proteinC.G.S.X.
0.540787Triticum aestivumTa.20453.1.S1_atCD932281--3e-2At4g39745hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.043e-136Vitis vinifera1619942_atCF568925--3e+0At3g57370transcription factor IIB (TFIIB) family proteinC.G.S.X.
0.235e-47188Zea maysZm.9181.1.A1_atCA402930hypothetical protein LOC100192510-5e-2At2g28710zinc finger (C2H2 type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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