Gene omics information

Query gene ID Contig6491_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5975.8Contig6491_atContig6491--6e-1At5g02230haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.5975.8Contig13436_atContig13436--3e-1At3g23200unknown proteinS.X.H.G.
0.5369.7Contig8059_atContig8059--8e-18At1g08720EDR1 (ENHANCED DISEASE RESISTANCE 1)S.X.H.G.
0.4863.2Contig13168_atContig13168--3e+0At5g50130short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.4762.2Contig8925_atContig8925--3e+0At5g66060iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsS.X.H.G.
0.4762.2Contig24772_atContig24772--1e-4At5g63740zinc finger protein-relatedS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.799.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
15.799.6GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
13.399.4GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
13.299.4GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
13.299.4GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
12.999.4GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.599.3GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.199.2GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.099.2GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
11.099.2GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.346e-55214EBpi01_SQ005_P17_atEBpi01_SQ005_P17--2e+0At5g02230haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.039e-857Contig4956_atContig4956--2e+0At5g01840OFP1 (OVATE FAMILY PROTEIN 1)C.G.S.X.
0.039e-857Contig4955_s_atContig4955--2e+0At5g01840OFP1 (OVATE FAMILY PROTEIN 1)C.G.S.X.
0.025e-342Contig11406_atContig11406--3e-1At4g16790hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.022e-240Contig10775_atContig10775--2e-6At1g05805basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.012e-240Contig9252_atContig9252--2e-47At4g38620MYB4C.G.S.X.
0.072e-240HW02N11u_atHW02N11u--2e-4At5g59480haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.012e-240Contig8611_atContig8611--1e-21At4g39280phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putativeC.G.S.X.
0.022e-240Contig5978_atContig5978--2e+0At5g65070MAF4 (MADS AFFECTING FLOWERING 4)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.086e-136Arabidopsis thalianaAt5g02230831784haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA---C.G.S.X.
0.046e-240Glycine maxGma.5513.1.S1_atAW310453--3e-15At5g02230haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.452e-91337Oryza sativaOs01g0973000NM_189475.1-Pyrimidine 5-nucleotidase family protein1e-1At5g59490haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.219184.1.S1_atpmrna35034--6e+0At5g61110protein binding / zinc ion bindingC.G.S.X.
0.610827Triticum aestivumTa.3251.1.A1_atBJ254301grip21 protein-2e+0At2g14900gibberellin-regulated family proteinC.G.S.X.
0.043e-342Vitis vinifera1609963_atCF514599hypothetical protein LOC100245055-9e-8At5g59480haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.467e-70264Zea maysZm.1739.1.A1_atBM337820catalytic/ hydrolase-1e-1At3g04590DNA-binding family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage