Gene omics information

Query gene ID Contig6329_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig6329_atContig6329--3e-31At2g40490HEME2S.X.H.G.
0.6178.7Contig6946_atContig6946--1e-5At5g01200myb family transcription factorS.X.H.G.
0.5066.9Contig12065_atContig12065--1e+0At5g61670-S.X.H.G.
0.3647.1Contig4476_atContig4476--7e-26At5g63620oxidoreductase, zinc-binding dehydrogenase family proteinS.X.H.G.
0.2835.5HT07O19u_s_atHT07O19u--2e+0At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)S.X.H.G.
0.2732.1Contig8876_atContig8876--2e+0At3g25577unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.199.1GSM161200cold treatment rep1GSE6993Barley low temperature stress
9.599.0GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
9.098.9GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatment
8.598.8GSM160815drought control rep3GSE6990Barley drought stress
7.898.6GSM161221cold treatment rep3GSE6993Barley low temperature stress
7.898.6GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.898.3GSM261021ABA-Control-rep1GSE10328ABA experiment
6.598.2GSM261034Dicktoo-chilling-rep2GSE10329Low temperature stress in cv. Dicktoo
6.598.2GSM130799control, biological rep1GSE5605Expression data from barley under salinity stress and JA treatment
6.598.2GSM130806JA and salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-138Contig5087_atContig5087--1e-2At4g17520nuclear RNA-binding protein, putativeC.G.S.X.
0.024e-136HVSMEf0013H13r2_atHVSMEf0013H13r2--1e+0At5g65420CYCD4C.G.S.X.
0.012e+034Contig14026_atContig14026--3e-3At1g01720ATAF1C.G.S.X.
0.012e+034Contig7120_atContig7120--4e-18At1g55880pyridoxal-5'-phosphate-dependent enzyme, beta family proteinC.G.S.X.
0.012e+034Contig5830_s_atContig5830--7e+0At2g25060plastocyanin-like domain-containing proteinC.G.S.X.
0.022e+034Contig26597_atContig26597--9e-2At5g47330palmitoyl protein thioesterase family proteinC.G.S.X.
0.022e+034Contig20919_atContig20919--5e+0At3g62820invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.012e+034Contig8176_atContig8176--8e-32At1g05350thiF family proteinC.G.S.X.
0.012e+034Contig5831_atContig5831--2e+0At3g51500unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.263e-31137Arabidopsis thalianaAt2g40490818644HEME2F:uroporphyrinogen decarboxylase activity;P:porphyrin biosynthetic process;C:chloroplast, chloroplast stroma, chloroplast envelope;OBMAFP---C.G.S.X.
0.292e-33145Glycine maxGma.6694.1.S1_atCA820228--2e-3At2g40490HEME2C.G.S.X.
0.7101241Oryza sativaOs03g0337600AK070859.1-Uroporphyrinogen decarboxylase (EC 4.1.1.37)(URO-D) (UPD) (Fragment)3e-19At2g40490HEME2C.G.S.X.
0.251e-46188Populus trichocarpaPtpAffx.15853.1.S1_atCV237574hypothetical protein-2e-41At2g40490HEME2C.G.S.X.
0.9001713Triticum aestivumTa.28648.1.S1_s_atCA630278--2e-13At2g40490HEME2C.G.S.X.
0.046e-238Vitis vinifera1621781_atBQ793396--2e+0At5g43260chaperone protein dnaJ-relatedC.G.S.X.
0.6401084Zea maysZm.385.1.A1_atAF058763.1Lesion22-1e-21At2g40490HEME2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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