Gene omics information

Query gene ID Contig6258_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig6258_s_atContig6258--6e-1At5g60340maoC-like dehydratase domain-containing proteinS.X.H.G.
0.1615.3HU11H18u_s_atHU11H18u--7e-1At1g51400photosystem II 5 kD proteinS.X.H.G.
0.075.8Contig6256_s_atContig6256--2e+1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)S.X.H.G.
0.054.1Contig23381_atContig23381--2e+0At3g05327-S.X.H.G.
0.021.8HB26H03r_s_atHB26H03r--3e+0At5g62470MYB96 (myb domain protein 96)S.X.H.G.
0.011.1HY04M24u_s_atHY04M24u--1e-2At1g54217Expressed proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.3GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
8.298.7GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
6.798.3GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
6.798.3GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
6.698.2GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seeds
5.797.7GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
5.397.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.297.4GSM282022Malting_day4_Merit_rep4GSE11200Expression data from malting barley seeds
5.297.4GSM282024Malting_day4_Merit_rep2GSE11200Expression data from malting barley seeds
5.097.2GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.418e-156547Contig6261_atContig6261--6e-10At2g35790unknown proteinC.G.S.X.
0.041e+032HZ54L05r_atHZ54L05r--1e+0At3g55790unknown proteinC.G.S.X.
0.025e+030Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.035e+030Contig5083_atContig5083--3e-2At2g30410KIS (KIESEL)C.G.S.X.
0.025e+030Contig3203_atContig3203--1e-35At1g22450COX6B (CYTOCHROME C OXIDASE 6B)C.G.S.X.
0.032e+128HVSMEn0004H06r2_atHVSMEn0004H06r2--4e-16At2g18390TTN5 (TITAN 5)C.G.S.X.
0.032e+128HVSMEg0012J16r2_atHVSMEg0012J16r2--3e-1At4g32030unknown proteinC.G.S.X.
0.012e+128Contig8951_atContig8951--9e-4At4g00090transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.022e+128Contig8947_atContig8947--4e-2At3g20800rcd1-like cell differentiation protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-134Arabidopsis thalianaAt5g60340836156maoC-like dehydratase domain-containing proteinF:oxidoreductase activity, ATP binding;P:metabolic process;C:mitochondrion;BOMFAP---C.G.S.X.
0.053e+032Glycine maxGmaAffx.87254.1.S1_atBM307700--9e-6At1g60030xanthine/uracil permease family proteinC.G.S.X.
0.021e+034Oryza sativaOs03g0169100AK099215.1-Ribulose-phosphate 3-epimerase, chloroplastprecursor (EC 5.1.3.1) (Pentose-5-phosphate 3-epimerase)(PPE) (RPE) (R5P3E)6e-66At5g61410RPEC.G.S.X.
0.043e+032Populus trichocarpaPtpAffx.114727.2.A1_s_atCV246123hypothetical protein-6e-6At1g21480exostosin family proteinC.G.S.X.
0.476e-38157Triticum aestivumTa.12678.3.A1_atCK211168--3e-1At2g35790unknown proteinC.G.S.X.
0.043e+030Vitis vinifera1614693_atCF514789--4e+0At3g12345unknown proteinC.G.S.X.
0.042e+128Zea maysZmAffx.896.1.A1_atAI770881--3e+0At5g57620MYB36 (myb domain protein 36)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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