Gene omics information

Query gene ID Contig6256_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.6Contig6256_s_atContig6256--2e+1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)S.X.H.G.
0.3849.5Contig5709_atContig5709--3e-56At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseS.X.H.G.
0.3647.1Contig7870_atContig7870--9e-6At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeS.X.H.G.
0.3647.1Contig6445_atContig6445--1e-1At2g20920unknown proteinS.X.H.G.
0.3545.1Contig11015_atContig11015--1e-29At4g14147ARPC4S.X.H.G.
0.3443.6Contig10961_atContig10961--2e-1At1g78260RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.3240.3Contig8908_atContig8908--3e-12At2g21270ubiquitin fusion degradation UFD1 family proteinS.X.H.G.
0.3138.6Contig8129_atContig8129--5e-1At1g23145RALFL2 (RALF-LIKE 2)S.X.H.G.
0.2935.5Contig6627_atContig6627--1e-6At1g77710-S.X.H.G.
0.2630.4Contig5746_atContig5746--3e+0At5g64820unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.899.5GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.899.4GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.899.2GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.099.1GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
10.099.1GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
7.098.4GSM398271HS41-1_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.798.3GSM398278Moroc9-75_1d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.298.0GSM398267HS41-1_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.097.9GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
6.097.9GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001184Contig6256_atContig6256--2e+1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)C.G.S.X.
0.640668HB02A02_T3_atHB02A02_T3--2e+1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)C.G.S.X.
0.665e-131466Contig21234_atContig21234--1e+0At2g43350ATGPX3 (GLUTATHIONE PEROXIDASE 3)C.G.S.X.
0.031e-136Contig25178_atContig25178--3e-1At5g40382cytochrome-c oxidaseC.G.S.X.
0.026e-134Contig9798_atContig9798--7e-1At5g59150ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D)C.G.S.X.
0.046e-134Contig16640_atContig16640--3e-1At5g21430DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.036e-134Contig15820_atContig15820--4e-4At3g59060PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)C.G.S.X.
0.022e+032Contig11418_atContig11418--8e-3At1g51270structural molecule/ transmembrane receptorC.G.S.X.
0.022e+032Contig13799_atContig13799--2e-5At1g77120ADH1 (ALCOHOL DEHYDROGENASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+130Arabidopsis thalianaAt5g017126241400CPuORF48 (Conserved peptide upstream open reading frame 48)Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF48 represents a conserved upstream opening reading frame relative to major ORF AT5G01710.1---C.G.S.X.
0.042e+034Glycine maxPsAffx.psZG001xJ21f_atPsAffx.psZG001xJ21f--1e+1At4g16500cysteine protease inhibitor family protein / cystatin family proteinC.G.S.X.
0.133e-1583Oryza sativaOs05g0136200AK059282.1-CBL-interacting protein kinase 12e-4At1g48260CIPK17 (CBL-INTERACTING PROTEIN KINASE 17)C.G.S.X.
0.036e+032Populus trichocarpaPtpAffx.209992.1.S1_atpmrna19712hypothetical protein-3e+0At5g05620GCP2 (GAMMA-TUBULIN COMPLEX PROTEIN 2)C.G.S.X.
0.377e-101367Triticum aestivumTaAffx.3524.1.S1_atBE418657--2e-4At1g48260CIPK17 (CBL-INTERACTING PROTEIN KINASE 17)C.G.S.X.
0.032e-238Vitis vinifera1620974_atCA815987hypothetical protein LOC100267239-4e-7At5g51510unknown proteinC.G.S.X.
0.038e+030Zea maysZmAffx.67.1.A1_atAI665138hypothetical protein LOC100277004-1e+1At5g55990CBL2 (CALCINEURIN B-LIKE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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