Gene omics information

Query gene ID Contig6238_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)S.X.H.G.
0.8394.0Contig6233_s_atContig6233--3e-8At5g08790ATAF2S.X.H.G.
0.6077.3Contig6235_s_atContig6235--1e+0At3g27850RPL12-C (ribosomal protein l12-c)S.X.H.G.
0.5572.0Contig15767_atContig15767--1e-1At1g21520unknown proteinS.X.H.G.
0.4458.9HVSMEf0003F23r2_atHVSMEf0003F23r2--9e-1At5g09570-S.X.H.G.
0.2732.1Contig6433_atContig6433--5e-1At5g66460(1-4)-beta-mannan endohydrolase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
30.599.9GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
24.099.8GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
23.999.8GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
22.499.8GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
22.499.8GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
21.599.8GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
21.299.7GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
20.399.7GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
18.999.7GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
18.699.7GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.249e-1683Contig13240_s_atContig13240--4e-1At3g24750unknown proteinC.G.S.X.
0.214e-1271Contig1597_s_atContig1597--2e+0At2g16575unknown proteinC.G.S.X.
0.061e-859Contig21026_atContig21026--2e+0At2g30870GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)C.G.S.X.
0.075e-857Contig2976_atContig2976--3e+0At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.075e-857Contig2975_s_atContig2975--2e+0At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.073e-652Contig2425_s_atContig2425--2e+0At5g06900CYP93D1C.G.S.X.
0.073e-652Contig2425_atContig2425--2e+0At5g06900CYP93D1C.G.S.X.
0.055e-548HVSMEa0001A19r2_x_atHVSMEa0001A19r2--1e+1At4g24340phosphorylase family proteinC.G.S.X.
0.055e-548HVSMEa0001A19r2_atHVSMEa0001A19r2--1e+1At4g24340phosphorylase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-757Arabidopsis thalianaAt2g30860817636ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).---C.G.S.X.
0.036e-136Glycine maxPsAffx.CL283Contig1_atPsAffx.CL283Contig1--6e-2At4g10970unknown proteinC.G.S.X.
0.552e-44180Oryza sativaOs01g0369700AF309382.1-Glutathione S-transferase GST 8 (EC 2.5.1.18)2e+0At5g53250AGP22 (ARABINOGALACTAN PROTEIN 22)C.G.S.X.
0.026e-136Populus trichocarpaPtpAffx.211928.1.S1_atpmrna23424hypothetical protein-2e+0At2g33793unknown proteinC.G.S.X.
0.730831Triticum aestivumTa.5629.1.S1_x_atBT009443.1--2e-3At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.042e-342Vitis vinifera1616495_atCF517304glutathione S-transferase 5-1e-1At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)C.G.S.X.
0.427e-35147Zea maysZm.539.1.A1_atAF244673.1Glutathione S-transferase 8-1e-1At5g52550unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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