Gene omics information

Query gene ID Contig6235_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8092.5Contig6235_s_atContig6235--1e+0At3g27850RPL12-C (ribosomal protein l12-c)S.X.H.G.
0.8092.5Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)S.X.H.G.
0.7790.8Contig6233_s_atContig6233--3e-8At5g08790ATAF2S.X.H.G.
0.7388.7Contig15767_atContig15767--1e-1At1g21520unknown proteinS.X.H.G.
0.4458.9HVSMEf0003F23r2_atHVSMEf0003F23r2--9e-1At5g09570-S.X.H.G.
0.3138.6Contig3365_atContig3365--2e-85At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.299.7GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
19.799.7GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.999.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.299.6GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
15.299.5GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.499.4GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.899.4GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.999.3GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.199.2GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.999.2GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.363e-101367Contig6233_atContig6233--3e-8At5g08790ATAF2C.G.S.X.
0.363e-101367Contig6233_s_atContig6233--3e-8At5g08790ATAF2C.G.S.X.
0.077e-1683Contig15241_atContig15241--6e+0At3g44280unknown proteinC.G.S.X.
0.022e-446Contig6485_atContig6485--3e-1At5g24630BIN4 (brassinosteroid-insensitive4)C.G.S.X.
0.044e-238HVSMEa0005I19r2_atHVSMEa0005I19r2--4e+0At5g64541unknown proteinC.G.S.X.
0.044e-238Contig25516_atContig25516--8e-1At2g39000GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.024e-238Contig8006_atContig8006--6e-1At4g13100zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.014e-238Contig7226_atContig7226--2e-21At3g54540ATGCN4C.G.S.X.
0.022e-136Contig14284_atContig14284--4e-1At4g28240wound-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt3g27850822405RPL12-C (ribosomal protein l12-c)50S ribosomal protein L12-C---C.G.S.X.
0.034e-136Glycine maxPsAffx.psZS010xK06f_s_atPsAffx.psZS010xK06f--3e-1At1g19300PARVUS (PARVUS)C.G.S.X.
0.078e-1685Oryza sativaOs01g0884300AK068392.1-No apical meristem (NAM) protein domain containingprotein7e-29At1g01720ATAF1C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.214571.1.S1_atpmrna28306hypothetical protein-3e-9At4g32295unknown proteinC.G.S.X.
0.043e-136Triticum aestivumTaAffx.81306.1.S1_atCA687646--8e+0At3g56030-C.G.S.X.
0.041e-446Vitis vinifera1612905_s_atCB345326hypothetical protein LOC100258381-5e-3At1g12830unknown proteinC.G.S.X.
0.083e-1891Zea maysZm.4838.1.A1_atAI649483--1e-5At1g01720ATAF1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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