Gene omics information

Query gene ID Contig609_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4661.0Contig609_atContig609--7e+0At2g04420nucleic acid bindingS.X.H.G.
0.6178.7Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
0.5066.9Contig15165_s_atContig15165--2e+0At3g28460unknown proteinS.X.H.G.
0.4762.2Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinS.X.H.G.
0.4053.1Contig4763_atContig4763--3e-7At4g39960DNAJ heat shock family proteinS.X.H.G.
0.3849.5Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
65.3100.0GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
34.899.9GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
33.899.9GSM146372Golden Promise shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
23.699.8GSM146378Maythorpe shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
20.199.7GSM146370Golden Promise shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.999.6GSM146380Maythorpe shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.699.6GSM146379Maythorpe shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.299.5GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.599.3GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
10.499.2GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.464e-166583Contig179_s_atContig179--4e+0At5g65360histone H3C.G.S.X.
0.464e-166583Contig179_atContig179--4e+0At5g65360histone H3C.G.S.X.
0.026e-238Contig15966_atContig15966--1e-1At3g55960NLI interacting factor (NIF) family proteinC.G.S.X.
0.022e-136Contig1523_atContig1523--9e-40At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)C.G.S.X.
0.032e-136HZ40A08r_atHZ40A08r--4e+0At5g52965unknown proteinC.G.S.X.
0.022e-136AF474072_CDS-4_atAF474072_CDS-4--1e+0At5g05810ATL43C.G.S.X.
0.022e-136Contig12911_atContig12911--3e-12At4g06599ubiquitin family proteinC.G.S.X.
0.012e-136Contig8943_atContig8943--1e-6At1g7599026S proteasome regulatory subunit S3, putative (RPN3)C.G.S.X.
0.012e-136Contig5827_atContig5827--7e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e+032Arabidopsis thalianaAt2g04420814982nucleic acid bindingF:nucleic acid binding;P:biological_process unknown;C:mitochondrion;PBO---C.G.S.X.
0.032e-138Glycine maxPsAffx.C73000019_atPsAffx.C73000019--3e-1At4g23800high mobility group (HMG1/2) family proteinC.G.S.X.
0.136e-859Oryza sativaOs07g0590800AK062359.1-Hypothetical protein1e+0At5g61490-C.G.S.X.
0.033e+034Populus trichocarpaPtpAffx.220460.1.S1_atpmrna36853hypothetical protein-3e+0At5g20570RBX1 (RING-BOX 1)C.G.S.X.
0.584e-106385Triticum aestivumTa.27262.1.S1_a_atCA652211--6e+0At3g15300VQ motif-containing proteinC.G.S.X.
0.028e+030Vitis vinifera1621203_atCF515455--1e+0At5g07600oleosin / glycine-rich proteinC.G.S.X.
0.128e-444Zea maysZm.16934.1.A1_atAY108912.1transcriptional regulatory protein algP-3e-1At4g03580-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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