Gene omics information

Query gene ID Contig6006_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig6006_s_atContig6006--3e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeS.X.H.G.
0.9198.1Contig6005_x_atContig6005--3e-1At1g20130hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallS.X.H.G.
0.6784.7Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.6784.7Contig2041_x_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.5066.9Contig8898_atContig8898--2e-29At2g25570bindingS.X.H.G.
0.4458.9Contig4406_x_atContig4406--2e+0At4g25110AtMC2 (metacaspase 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
76.7100.0GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
65.3100.0GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
30.799.9GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
23.299.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
19.999.7GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
15.299.5GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
14.899.5GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. Dicktoo
13.499.4GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. Dicktoo
8.798.9GSM261039Dicktoo-deacclimation-rep1GSE10329Low temperature stress in cv. Dicktoo
7.198.4GSM261037Dicktoo-subzero-rep2GSE10329Low temperature stress in cv. Dicktoo
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.290722Contig6005_x_atContig6005--3e-1At1g20130hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallC.G.S.X.
0.634e-106383Contig6004_x_atContig6004--1e+0At4g01640-C.G.S.X.
0.634e-106383Contig6004_atContig6004--1e+0At4g01640-C.G.S.X.
0.301e-31135HZ49N13r_atHZ49N13r--3e+0At5g47320RPS19 (RIBOSOMAL PROTEIN S19)C.G.S.X.
0.023e-238Contig9679_atContig9679--2e-1At5g48370thioesterase family proteinC.G.S.X.
0.051e-136EBro03_SQ005_N20_atEBro03_SQ005_N20--3e+0At3g29370unknown proteinC.G.S.X.
0.014e-134Contig4778_atContig4778--6e-8At3g53710AGD6C.G.S.X.
0.024e-134Contig10300_atContig10300--4e-2At4g21740unknown proteinC.G.S.X.
0.012e+032Contig6275_atContig6275--4e-10At1g14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt1g60830842376U2 snRNP auxiliary factor large subunit, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFP---C.G.S.X.
0.041e+034Glycine maxHgAffx.16678.1.S1_atCB279678--9e-1At5g45880pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.117e-652Oryza sativaOs03g0314500AK065474.1-Quinonprotein alcohol dehydrogenase-like domaincontaining protein1e+0At1g13860dehydration-responsive protein-relatedC.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.217079.1.S1_atpmrna32216hypothetical protein-3e+0At5g09710magnesium transporter CorA-like family proteinC.G.S.X.
0.202e-26119Triticum aestivumTaAffx.109962.1.S1_atAJ611533--5e+0At5g26940exonuclease family proteinC.G.S.X.
0.044e+030Vitis vinifera1618759_atCB348270hypothetical protein LOC100256813-1e+0At1g76010nucleic acid bindingC.G.S.X.
0.043e-134Zea maysZm.5169.1.A1_atAY104222.1Fructokinase 1-7e-4At1g06020pfkB-type carbohydrate kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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