Gene omics information

Query gene ID Contig5985_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6985.5Contig5985_atContig5985--1e-3At3g50590nucleotide bindingS.X.H.G.
0.6077.3HW09F23V_s_atHW09F23V--3e+0At4g10240zinc finger (B-box type) family proteinS.X.H.G.
0.5369.7Contig23513_atContig23513--7e+0At5g49260unknown proteinS.X.H.G.
0.4053.1Contig6263_atContig6263--2e+0At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)S.X.H.G.
0.3849.5Contig3699_s_atContig3699--1e+0At2g26060emb1345 (embryo defective 1345)S.X.H.G.
0.3443.6Contig11819_s_atContig11819--3e-3At1g08320bZIP family transcription factorS.X.H.G.
0.3342.6Contig10705_atContig10705--9e-13At3g56850AREB3 (ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3)S.X.H.G.
0.2630.4Contig5586_atContig5586--2e-8At1g48350ribosomal protein L18 family proteinS.X.H.G.
0.2427.2Contig4366_atContig4366--5e-16At5g49810MMTS.X.H.G.
0.2224.2Contig5696_atContig5696--7e-3At5g48335unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.499.3GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
10.699.2GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
10.699.2GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
6.298.0GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
6.198.0GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
5.697.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
5.597.6GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
5.297.4GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
5.297.4GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.223e-119428HA11D16u_s_atHA11D16u--2e+0At1g08520CHLDC.G.S.X.
0.011e-138HA09n12r_atHA09n12r--2e-1At3g43850unknown proteinC.G.S.X.
0.011e-138Contig11686_atContig11686--3e+0At5g67640unknown proteinC.G.S.X.
0.011e-138Contig10278_atContig10278--3e+0At1g12080unknown proteinC.G.S.X.
0.015e-136Contig4470_s_atContig4470--3e-1At1g12240ATBETAFRUCT4C.G.S.X.
0.015e-136Contig16046_atContig16046--1e+0At5g10860CBS domain-containing proteinC.G.S.X.
0.012e+034Contig6768_atContig6768--4e-4At4g30160VLN4 (ARABIDOPSIS THALIANA VILLIN 4)C.G.S.X.
0.022e+034rbags17d18_s_atrbags17d18--2e+1At5g41660unknown proteinC.G.S.X.
0.012e+034Contig6918_s_atContig6918--2e+0At5g65220ribosomal protein L29 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-346Arabidopsis thalianaAt3g50590824223nucleotide bindingF:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPV---C.G.S.X.
0.032e-242Glycine maxGma.11249.1.S1_atAW348404--3e-47At3g50590nucleotide bindingC.G.S.X.
0.462e-145517Oryza sativaOs09g0408000AK059658.1-Conserved hypothetical protein2e-11At3g50590nucleotide bindingC.G.S.X.
0.052e-656Populus trichocarpaPtp.6322.2.A1_a_atCV241840--4e-1At1g61810BGLU45 (BETA-GLUCOSIDASE 45)C.G.S.X.
0.6103043Triticum aestivumTa.6698.1.S1_atCK200349--2e-9At3g50590nucleotide bindingC.G.S.X.
0.011e+034Vitis vinifera1619607_s_atCF202338.1hypothetical protein LOC100242775-7e-3At4g11020unknown proteinC.G.S.X.
0.530787Zea maysZm.5951.1.A1_atAI665912--3e-14At3g50590nucleotide bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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