Gene omics information

Query gene ID Contig5966_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig5966_atContig5966--9e-2At4g33360terpene cyclase/mutase-relatedS.X.H.G.
0.6784.7Contig5969_atContig5969--7e-4At1g64970G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)S.X.H.G.
0.6784.7Contig10453_atContig10453--9e-1At5g19485transferaseS.X.H.G.
0.5066.9Contig13318_atContig13318--1e-2At3g59010pectinesterase family proteinS.X.H.G.
0.4053.1EBpi01_SQ002_O15_atEBpi01_SQ002_O15--2e+0At5g47130Bax inhibitor-1 family / BI-1 familyS.X.H.G.
0.3849.5Contig5809_atContig5809--2e-14At1g58440XF1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.298.5GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seeds
6.398.1GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.298.0GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
6.097.9GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
6.097.9GSM146376Maythorpe shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.697.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.197.3GSM146378Maythorpe shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.097.2GSM130800control, biological rep2GSE5605Expression data from barley under salinity stress and JA treatment
4.997.1GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.796.9GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-81301S0001100160A01F1_atS0001100160A01F1--4e+0At2g36230APG10 (ALBINO AND PALE GREEN 10)C.G.S.X.
0.026e-134Contig10312_atContig10312--4e-1At4g3613060S ribosomal protein L8 (RPL8C)C.G.S.X.
0.023e+032Contig12524_atContig12524--5e-1At1g05310pectinesterase family proteinC.G.S.X.
0.013e+032Contig10268_atContig10268--3e-16At3g53130LUT1 (LUTEIN DEFICIENT 1)C.G.S.X.
0.013e+032Contig6705_atContig6705--2e-20At3g17810dihydroorotate dehydrogenase family protein / dihydroorotate oxidase family proteinC.G.S.X.
0.013e+032Contig6589_atContig6589--1e-9At1g14570UBX domain-containing proteinC.G.S.X.
0.013e+032Contig2848_atContig2848--4e-8At1g44910protein bindingC.G.S.X.
0.023e+032AF032687_atAF032687--2e+0At3g52130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.023e+032Contig10748_atContig10748--1e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.029e-238Arabidopsis thalianaAt4g33360829473terpene cyclase/mutase-relatedF:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, terpenoid metabolic process, metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPFMAV---C.G.S.X.
0.108e-652Glycine maxGmaAffx.90454.1.A1_atCF808712--5e-23At2g39990EIF2C.G.S.X.
0.547e-112404Oryza sativaOs05g0104800AK070215.1-Eukaryotic translation initiation factor 3 subunit5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)6e-4At2g39990EIF2C.G.S.X.
0.071e-448Populus trichocarpaPtp.2051.1.S1_atCV243394hypothetical protein-2e-16At2g39990EIF2C.G.S.X.
0.600985Triticum aestivumTa.30743.1.S1_atCK169502--7e-1At2g39990EIF2C.G.S.X.
0.142e-652Vitis vinifera1617806_atBQ797048hypothetical protein LOC100249540-4e-10At2g39990EIF2C.G.S.X.
0.331e-66252Zea maysZm.5273.1.A1_atBM497669hypothetical protein LOC100272886-7e-1At2g39990EIF2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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