Gene omics information

Query gene ID Contig5842_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5674.3Contig5842_atContig5842--8e-6At3g12820AtMYB10 (myb domain protein 10)S.X.H.G.
0.6077.3Contig1881_s_atContig1881--7e-1At1g18650PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)S.X.H.G.
0.5369.7Contig13144_atContig13144--8e-23At5g03540ATEXO70A1 (exocyst subunit EXO70 family protein A1)S.X.H.G.
0.3240.3Contig7539_s_atContig7539--3e-13At4g07960ATCSLC12 (CELLULOSE-SYNTHASE LIKE C12)S.X.H.G.
0.2427.2Contig13145_atContig13145--6e+0At1g24577unknown proteinS.X.H.G.
0.1818.2Contig5020_s_atContig5020--4e-5At2g41250haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.499.4GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
10.599.2GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
9.399.0GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
6.798.3GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.698.2GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.797.7GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
5.397.4GSM261022ABA-Control-rep2GSE10328ABA experiment
4.897.0GSM261021ABA-Control-rep1GSE10328ABA experiment
4.796.9GSM261025ABA-Early-rep2GSE10328ABA experiment
4.696.8GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001869Contig5842_s_atContig5842--8e-6At3g12820AtMYB10 (myb domain protein 10)C.G.S.X.
0.261e-79295Contig5841_atContig5841--4e-6At3g23250MYB15 (MYB DOMAIN PROTEIN 15)C.G.S.X.
0.173e-34145Contig9252_atContig9252--2e-47At4g38620MYB4C.G.S.X.
0.191e-30133X70876_atX70876--7e-19At4g38620MYB4C.G.S.X.
0.263e-28125Contig9250_s_atContig9250--3e-19At4g38620MYB4C.G.S.X.
0.085e-21101Contig14337_atContig14337--4e-8At5g12870MYB46 (MYB DOMAIN PROTEIN 46)C.G.S.X.
0.091e-1893Contig13879_atContig13879--6e-4At4g38620MYB4C.G.S.X.
0.104e-961Contig18020_atContig18020--1e-8At3g01530AtMYB57 (myb domain protein 57)C.G.S.X.
0.102e-859Contig7471_atContig7471--9e-3At4g26930MYB97 (myb domain protein 97)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.088e-652Arabidopsis thalianaAt3g12820820464AtMYB10 (myb domain protein 10)Member of the R2R3 factor gene family.---C.G.S.X.
0.101e-1481Glycine maxGma.4207.3.S1_a_atBE804803MYB transcription factor MYB48-1e-52At4g38620MYB4C.G.S.X.
0.442e-113410Oryza sativaOs02g0624300AK112056.1-MYB1 protein9e-6At3g23250MYB15 (MYB DOMAIN PROTEIN 15)C.G.S.X.
0.062e-138Populus trichocarpaPtpAffx.202002.1.S1_atpmrna3994hypothetical protein-5e-27At5g57620MYB36 (myb domain protein 36)C.G.S.X.
0.799e-163573Triticum aestivumTaAffx.81130.1.S1_atBJ284498--2e-3At4g22680MYB85 (myb domain protein 85)C.G.S.X.
0.114e-548Vitis vinifera1619454_atCF568815--1e-55At4g38620MYB4C.G.S.X.
0.389e-87319Zea maysZm.11694.1.A1_atCK369414R2R3MYB-domain protein-2e-5At3g12820AtMYB10 (myb domain protein 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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