Gene omics information

Query gene ID Contig5709_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7388.7Contig5709_atContig5709--3e-56At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseS.X.H.G.
0.6077.3Contig4090_s_atContig4090triticain beta 2-4e-7At5g43060cysteine proteinase, putative / thiol protease, putativeS.X.H.G.
0.4458.9Contig11015_atContig11015--1e-29At4g14147ARPC4S.X.H.G.
0.4458.9Contig8129_atContig8129--5e-1At1g23145RALFL2 (RALF-LIKE 2)S.X.H.G.
0.2935.5Contig4091_atContig4091--3e-13At1g47128RD21 (responsive to dehydration 21)S.X.H.G.
0.2732.1Contig18916_atContig18916--9e-1At5g09995unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.499.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.198.7GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.598.6GSM146375Maythorpe shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.498.5GSM146370Golden Promise shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.198.4GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.898.3GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.598.2GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.997.9GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.397.4GSM146378Maythorpe shoot Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.397.4GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-654Contig10310_atContig10310--8e-3At1g75690chaperone protein dnaJ-relatedC.G.S.X.
0.027e-652Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)C.G.S.X.
0.014e-446Contig7613_atContig7613--4e+0At5g56540AGP14 (ARABINOGALACTAN PROTEIN 14)C.G.S.X.
0.024e-446Contig8434_atContig8434--1e-1At1g74710isochorismate synthase 1 (ICS1) / isochorismate mutaseC.G.S.X.
0.022e-344Contig1383_s_atContig1383--5e-9At3g15353MT3 (METALLOTHIONEIN 3)C.G.S.X.
0.012e-344Contig4578_atContig4578--7e-9At5g21150PAZ domain-containing protein / piwi domain-containing proteinC.G.S.X.
0.022e-344Contig1383_atContig1383--5e-9At3g15353MT3 (METALLOTHIONEIN 3)C.G.S.X.
0.022e-344Contig21692_atContig21692--3e+0At2g35970harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinC.G.S.X.
0.022e-344Contig17054_atContig17054--8e+0At5g52110HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.353e-56220Arabidopsis thalianaAt2g30200817570[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseF:binding, transferase activity, [acyl-carrier-protein] S-malonyltransferase activity, catalytic activity;P:fatty acid biosynthetic process, metabolic process;C:chloroplast, chloroplast stroma;BOFMP---C.G.S.X.
0.311e-40169Glycine maxGma.704.2.S1_a_atBE440491malonyltransferase-4e-67At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
0.5601049Oryza sativaOs03g0297400AK101597.1-Malonyl-CoA:ACP transacylase (EC 2.3.1.39)(Fragment)6e-20At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
0.343e-69264Populus trichocarpaPtp.2916.1.S1_atDN500305hypothetical protein-5e-128At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
0.7801863Triticum aestivumTa.7488.1.S1_a_atCK192982--3e-22At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
0.061e-654Vitis vinifera1610627_atBQ796704hypothetical protein LOC100245074-2e-29At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
0.520896Zea maysZm.2208.1.S1_atCO527853malonyl CoA-acyl carrier protein transacylase-6e-51At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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