Gene omics information

Query gene ID	Contig568_s_at
Gene name	GRP94 homologue
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig568_s_at	Contig568	GRP94 homologue	-	4e-2	At1g06240	unknown protein	S.X.	H.G.	Please select
0.67	84.7	EBem09_SQ004_B23_s_at	EBem09_SQ004_B23	-	-	2e+0	At4g15750	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.60	77.3	Contig4283_at	Contig4283	-	-	9e-1	At2g40510	40S ribosomal protein S26 (RPS26A)	S.X.	H.G.	Please select
0.50	66.9	Contig5689_at	Contig5689	-	-	8e-1	At5g09470	mitochondrial substrate carrier family protein	S.X.	H.G.	Please select
0.38	49.5	Contig19275_at	Contig19275	-	-	9e-5	At3g13850	LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)	S.X.	H.G.	Please select
0.21	22.6	Contig3365_at	Contig3365	-	-	2e-85	At1g09100	RPT5B (26S proteasome AAA-ATPase subunit RPT5B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.8	98.3	GSM130803	JA, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment
5.2	97.4	GSM130805	JA and salinity stress, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment
4.4	96.6	GSM372950	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM372944	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM372947	genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM261044	before 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.9	95.8	GSM261043	before 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.9	95.8	GSM372960	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.18	2e-147	519	Contig91_at	Contig91	-	-	2e-67	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select
0.40	3e-103	373	Contig416_x_at	Contig416	-	-	5e-29	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select
0.54	4e-93	339	Contig71_s_at	Contig71	GRP94 homologue	-	1e-9	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please select
0.03	8e-2	36	Contig17730_at	Contig17730	-	-	2e+0	Atmg00516	-	C.G.	S.X.	Please select
0.03	3e-1	34	Contig12158_at	Contig12158	-	-	1e-1	At4g08230	glycine-rich protein	C.G.	S.X.	Please select
0.03	3e-1	34	Contig13506_at	Contig13506	-	-	1e-1	At3g53310	transcriptional factor B3 family protein	C.G.	S.X.	Please select
0.03	1e+0	32	rbasd15h01_s_at	rbasd15h01	-	-	6e-15	At3g03050	CSLD3 (CELLULOSE SYNTHASE-LIKE D3)	C.G.	S.X.	Please select
0.01	1e+0	32	Contig5049_at	Contig5049	-	-	9e-1	At1g66420	transcription regulator	C.G.	S.X.	Please select
0.03	1e+0	32	Contig21092_at	Contig21092	-	-	2e+0	At3g27350	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e-2	38	Arabidopsis thaliana	At1g06240	837134	unknown protein	F:unknown;P:biological_process unknown;C:unknown;BOPFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-1	36	Glycine max	HgAffx.11173.1.S1_at	CB935277	-	-	1e+0	At3g52920	unknown protein	C.G.	S.X.	Please select
0.04	8e-5	48	Oryza sativa	Os08g0104600	D30763.1	-	Ferredoxin I, chloroplast precursor (Anti-diseaseprotein 1)	6e-33	At4g24190	SHD (SHEPHERD)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	9e-1	34	Populus trichocarpa	PtpAffx.63735.1.S1_at	CF230987	hypothetical protein	-	4e+0	At4g16195	self-incompatibility protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.34	6e-32	137	Triticum aestivum	Ta.28235.1.A1_s_at	BJ214932	-	-	5e+0	At5g50760	auxin-responsive family protein	C.G.	S.X.	Please select
0.04	3e+0	30	Vitis vinifera	1618584_at	CD720161	-	-	3e+0	At4g35480	RHA3B	C.G.	S.X.	Please select
0.03	7e-2	36	Zea mays	Zm.8285.1.S1_at	CA826983	hypothetical protein LOC100276185	-	6e-3	At4g10810	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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