Gene omics information

Query gene ID Contig5396_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4863.2Contig5396_atContig5396--2e-23At5g56140KH domain-containing proteinS.X.H.G.
0.2935.5HZ46H23r_s_atHZ46H23r--3e+0At5g58590RANBP1 (RAN BINDING PROTEIN 1)S.X.H.G.
0.1311.6Contig7538_atContig7538--8e-11At5g14420RGLG2 (RING domain Ligase2)S.X.H.G.
0.032.6Contig7752_atContig7752--9e-1At4g18940cyclic phosphodiesterase, putativeS.X.H.G.
0.032.6Contig15080_atContig15080--2e+0At5g15265unknown proteinS.X.H.G.
0.000.2Contig9757_atContig9757--9e-16At3g04060anac046 (Arabidopsis NAC domain containing protein 46)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.899.7GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.599.6GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.499.4GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.499.4GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.299.4GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.099.4GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.399.3GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.999.2GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.098.7GSM261063Xantha s-46 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.398.5GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.460773S0000800206B12F1_s_atS0000800206B12F1--1e+1At5g42420transporter-relatedC.G.S.X.
0.011e-344Contig10633_atContig10633--4e-24At2g18750calmodulin-binding proteinC.G.S.X.
0.012e-240Contig6375_atContig6375--2e-35At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)C.G.S.X.
0.012e-240Contig7611_atContig7611--2e-7At4g34840ATMTN2C.G.S.X.
0.012e-240Contig6375_s_atContig6375--2e-35At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)C.G.S.X.
0.019e-238Contig6399_atContig6399--5e-9At3g07810heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeC.G.S.X.
0.019e-238Contig9965_atContig9965--4e-2At2g36190AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)C.G.S.X.
0.013e-136Contig15468_atContig15468--2e-4At5g56140KH domain-containing proteinC.G.S.X.
0.013e-136Contig5135_s_atContig5135--4e-2At2g23800GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-23111Arabidopsis thalianaAt5g56140835713KH domain-containing proteinF:RNA binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPBOFVA---C.G.S.X.
0.032e-138Glycine maxGma.17893.1.S1_atBE823222--6e-4At1g09660KH domain-containing quaking protein, putativeC.G.S.X.
0.529e-147521Oryza sativaOs02g0722700CB645017-Conserved hypothetical protein3e-14At5g56140KH domain-containing proteinC.G.S.X.
0.204e-963Populus trichocarpaPtpAffx.249.198.S1_s_atCV280578--1e-20At5g56140KH domain-containing proteinC.G.S.X.
0.8501996Triticum aestivumTa.3001.1.S1_atCK211723--4e-21At5g56140KH domain-containing proteinC.G.S.X.
0.046e-857Vitis vinifera1619534_atCB007558similar to Os02g0722700-2e+1At5g0296040S ribosomal protein S23 (RPS23B)C.G.S.X.
0.560700Zea maysZm.10170.2.S1_atBM078288Hypothetical protein LOC100194222-3e-14At5g56140KH domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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