Gene omics information

Query gene ID Contig5337_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig5337_atContig5337--7e-1At5g642502-nitropropane dioxygenase family / NPD familyS.X.H.G.
0.4458.9Contig21096_atContig21096--5e+0At3g12930-S.X.H.G.
0.4255.2HV_CEa0003B14r2_atHV_CEa0003B14r2--8e-1At4g24026unknown proteinS.X.H.G.
0.3849.5Contig9075_s_atContig9075--1e-1At5g59990-S.X.H.G.
0.3240.3Contig13636_atContig13636--9e-3At2g25650DNA-binding storekeeper protein-relatedS.X.H.G.
0.2224.2Contig26498_atContig26498--2e-2At4g00960protein kinase family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.599.5GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
12.499.4GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
9.599.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
9.399.0GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
8.998.9GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
8.898.9GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.698.8GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.498.5GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
7.098.4GSM372985genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.298.0GSM372981genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e-136Contig11160_atContig11160--4e-3At5g47240atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)C.G.S.X.
0.023e-136Contig5896_atContig5896--3e-5At3g02770dimethylmenaquinone methyltransferase family proteinC.G.S.X.
0.023e-136Contig13415_atContig13415--1e+0At3g01513unknown proteinC.G.S.X.
0.023e-136Contig20754_atContig20754--5e+0At5g41960unknown proteinC.G.S.X.
0.013e-136Contig12178_atContig12178--3e-3At3g06490MYB108 (myb domain protein 108)C.G.S.X.
0.013e-136Contig11014_atContig11014--9e-7At3g51130unknown proteinC.G.S.X.
0.013e-136Contig4720_atContig4720--2e-24At2g28000CPN60A (CHAPERONIN-60ALPHA)C.G.S.X.
0.011e+034Contig4833_atContig4833--2e-17At2g19940N-acetyl-gamma-glutamyl-phosphate reductase/ NAD or NADH binding / binding / catalytic/ oxidoreductase, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor / protein dimerizationC.G.S.X.
0.011e+034Contig13832_atContig13832--8e+0At5g40981unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-136Arabidopsis thalianaAt5g642508365462-nitropropane dioxygenase family / NPD familyF:oxidoreductase activity, catalytic activity;P:response to cadmium ion, response to symbiotic fungus, metabolic process;C:unknown;BOFPMA---C.G.S.X.
0.072e-138Glycine maxGmaAffx.67686.2.S1_atBI472192--1e+1At5g22791-C.G.S.X.
0.480656Oryza sativaOs08g0485400AK100705.1-2-nitropropane dioxygenase-like protein7e-2At5g642502-nitropropane dioxygenase family / NPD familyC.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.98849.1.S1_s_atBU820294hypothetical protein-1e-49At5g41260protein kinase family proteinC.G.S.X.
0.7701705Triticum aestivumTa.6099.1.S1_atCA667895--5e-2At5g642502-nitropropane dioxygenase family / NPD familyC.G.S.X.
0.051e-859Vitis vinifera1609567_atCF604738hypothetical protein LOC100241045-1e-3At5g642502-nitropropane dioxygenase family / NPD familyC.G.S.X.
0.031e+034Zea maysZm.9315.1.S1_atAW225214hypothetical protein LOC100274732-2e-5At4g39235unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage