CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig5258_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 Contig5258_at Contig5258 - - 2e-10 At5g13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) S.X. H.G.
0.91 98.1 Contig1401_at Contig1401 - - 3e-114 At5g43330 malate dehydrogenase, cytosolic, putative S.X. H.G.
0.83 94.0 Contig15559_at Contig15559 - - 4e-1 At2g30960 unknown protein S.X. H.G.
0.73 88.7 Contig18544_at Contig18544 - - 5e+0 At4g18930 cyclic phosphodiesterase S.X. H.G.
0.73 88.7 Contig14019_at Contig14019 - - 2e-16 At2g04650 ADP-glucose pyrophosphorylase family protein S.X. H.G.
0.67 84.7 Contig12924_at Contig12924 - - 3e+0 At4g14165 F-box family protein-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.3 99.8 GSM71139 OWB-D stress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
17.5 99.6 GSM71152 Barke stress and unstress replicate 3 GSE3170 Barley single feature polymorphisms and drought stress gene expression
16.0 99.6 GSM261028 ABA-Late-rep2 GSE10328 ABA experiment
12.9 99.4 GSM71141 OWB-D stress replicate 3 GSE3170 Barley single feature polymorphisms and drought stress gene expression
11.9 99.3 GSM261029 ABA-Late-rep3 GSE10328 ABA experiment
10.9 99.2 GSM71143 OWB-R stress replicate 2 GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.9 99.2 GSM71151 Barke stress and unstress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.4 99.2 GSM71140 OWB-D stress replicate 2 GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.2 99.1 GSM71153 Barke stress and unstress replicate 4 GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.2 99.1 GSM71142 OWB-R stress replicate 1 GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 1e-25 117 Contig2671_at Contig2671 - - 4e-8 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.18 2e-24 113 Contig2672_at Contig2672 xyloglucan xyloglucosyl transferase - 2e-3 At4g25810 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) C.G. S.X.
0.18 6e-15 81 Contig2673_at Contig2673 - - 1e-17 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.21 6e-15 81 Contig2670_x_at Contig2670 - - 5e-20 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.21 6e-15 81 Contig2670_s_at Contig2670 - - 5e-20 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.20 6e-15 81 Contig2669_at Contig2669 - - 8e-13 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.18 2e-14 79 Contig2957_at Contig2957 - - 4e-1 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.11 2e-14 79 HVSMEb0004L16r2_at HVSMEb0004L16r2 - - 1e+0 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
0.07 1e-9 63 Contig2958_at Contig2958 - - 3e+0 At4g25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.41 2e-10 67 Arabidopsis thaliana At5g13870 831233 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) EXGT-A4, endoxyloglucan transferase, - - - C.G. S.X.
0.33 3e-19 97 Glycine max Gma.2240.1.S1_at AW311147 endo-xyloglucan transferase - 2e-47 At5g13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) C.G. S.X.
0.61 0 1076 Oryza sativa Os.11465.1.S1_at - - - 0 C.G. S.X.
0.36 3e-28 127 Populus trichocarpa PtpAffx.1317.1.A1_x_at CN550376 hypothetical protein - 2e-21 At5g13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) C.G. S.X.
0.70 0 1423 Triticum aestivum Ta.30703.1.S1_at D16457.1 endo-xyloglucan transferase - 8e-4 At5g13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) C.G. S.X.
0.13 8e-7 54 Vitis vinifera 1619068_at CF215954 hypothetical protein LOC100250461 - 1e-13 At4g14130 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7) C.G. S.X.
0.59 0 912 Zea mays Zm.6419.1.A1_at CF635415 xyloglucan endotransglucosylase/hydrolase - 3e-6 At5g13870 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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