Gene omics information

Query gene ID Contig5153_at
Gene name chloroplast inner envelope protein-like
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8394.0Contig5153_atContig5153chloroplast inner envelope protein-like-3e+0At5g46860VAM3S.X.H.G.
0.9198.1HF01J12w_s_atHF01J12w--4e-1At2g32310-S.X.H.G.
0.9198.1Contig3337_s_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8092.5Contig2776_atContig2776--5e-20At3g22890APS1 (ATP SULFURYLASE 1)S.X.H.G.
0.4762.2rbags5f04_s_atrbags5f04--2e+0At3g61678unknown proteinS.X.H.G.
0.3545.1Contig8498_atContig8498--6e-8At4g36390radical SAM domain-containing protein / TRAM domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.097.9GSM372940genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.997.9GSM372976genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.797.7GSM372992genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.797.7GSM372956genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.797.7GSM281747Genotype: Steptoe - rep3GSE11182Steptoe x Morex seedling leaf comparison
5.497.5GSM372943genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.497.5GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.397.4GSM372961genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.297.4GSM372958genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.097.2GSM372997genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-240Contig5790_atContig5790--1e+0At1g56060unknown proteinC.G.S.X.
0.012e-240Contig12777_atContig12777--4e-9At1g04900unknown proteinC.G.S.X.
0.012e-240Contig14085_atContig14085--3e+0At5g08060unknown proteinC.G.S.X.
0.012e-240Contig5790_s_atContig5790--1e+0At1g56060unknown proteinC.G.S.X.
0.029e-238Contig5010_atContig5010--3e-20At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)C.G.S.X.
0.029e-238Contig21476_atContig21476--5e+0At5g39581unknown proteinC.G.S.X.
0.029e-238Contig5010_s_atContig5010--3e-20At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)C.G.S.X.
0.029e-238Contig5009_atContig5009--9e-18At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)C.G.S.X.
0.029e-238Contig1342_atContig1342--8e-21At1g22780PFL (POINTED FIRST LEAVES)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.013e+034Arabidopsis thalianaAt5g46860834730VAM3Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.---C.G.S.X.
0.021e+036Glycine maxGmaAffx.74793.1.S1_atBM308613--1e-21At2g30980ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta)C.G.S.X.
0.403e-32141Oryza sativaOs10g0492300AK120231.1-IAP1001e+0At4g35295homoserine kinase, putative / HSK, putativeC.G.S.X.
0.023e-138Populus trichocarpaPtp.5001.1.S1_atCV260560--6e-2At5g52440HCF106C.G.S.X.
0.6901491Triticum aestivumTa.3788.1.A1_atBJ253790--2e+0At1g30473metal ion bindingC.G.S.X.
0.026e-238Vitis vinifera1621059_atCF514079--1e+0At3g26800unknown proteinC.G.S.X.
0.013e-136Zea maysZm.13812.1.A1_atCA402618hypothetical protein LOC100193696-3e-67At4g18730RPL16BC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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