CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig514_s_at

Gene name ribosome-inactivating protein

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 84.7 Contig514_s_at Contig514 ribosome-inactivating protein - 5e-4 At5g15265 unknown protein S.X. H.G.
0.67 84.7 Contig14639_at Contig14639 - - 8e+0 At5g47175 LCR3 (Low-molecular-weight cysteine-rich 3) S.X. H.G.
0.42 55.2 Contig9852_at Contig9852 - - 2e+1 At5g62260 DNA binding S.X. H.G.
0.40 53.1 Contig6627_at Contig6627 - - 1e-6 At1g77710 - S.X. H.G.
0.27 32.1 Contig7966_at Contig7966 - - 4e+0 At2g42830 SHP2 (SHATTERPROOF 2) S.X. H.G.
0.21 22.6 Contig21004_at Contig21004 - - 2e+1 At5g19030 RNA recognition motif (RRM)-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
115.4 100.0 GSM238421 Endosperm 0 h; Seed germination Rep 2 GSE9365 Expression data from barley maturing and germinating grains
79.0 100.0 GSM238419 Endosperm 25DAF; Seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
45.4 99.9 GSM238423 Endosperm 24 h; Seed germination; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
33.2 99.9 GSM238425 Endosperm 48 h; Seed germination; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
12.9 99.4 GSM238418 Endosperm 25DAF; Seed development; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
12.3 99.4 GSM238420 Endosperm 0 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
10.3 99.1 GSM238422 Endosperm 24 h; Seed germination; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
8.7 98.9 GSM238410 Pericarp 8DAF; seed development; Rep 1 GSE9365 Expression data from barley maturing and germinating grains
5.1 97.3 GSM238417 Endosperm 16DAF; Seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
4.1 96.2 GSM238411 Pericarp 8DAF; seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1770 Contig572_at Contig572 - - 1e-1 At5g15265 unknown protein C.G. S.X.
0.53 8e-168 589 HZ58F11r_at HZ58F11r - - 5e-2 At5g15265 unknown protein C.G. S.X.
0.03 4e-3 42 HT09A14u_x_at HT09A14u - - 1e+1 At5g60330 unknown protein C.G. S.X.
0.02 4e-3 42 Contig2248_at Contig2248 - - 2e+0 At3g09270 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) C.G. S.X.
0.02 2e-2 40 Contig18494_at Contig18494 - - 1e-2 At4g35290 GLUR2 (GLUTAMATE RECEPTOR 2) C.G. S.X.
0.03 6e-2 38 HVSMEm0008B04r2_s_at HVSMEm0008B04r2 UDP-D-glucose epimerase 1 - 5e-9 At4g23920 UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2) C.G. S.X.
0.02 6e-2 38 Contig12574_at Contig12574 - - 2e+0 At4g16100 unknown protein C.G. S.X.
0.02 6e-2 38 Contig23208_at Contig23208 - - 3e-1 At4g30460 glycine-rich protein C.G. S.X.
0.02 2e-1 36 Contig14953_at Contig14953 - - 5e+0 At5g15830 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-4 46 Arabidopsis thaliana At5g15265 5008213 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 1e-2 42 Glycine max GmaAffx.75467.1.S1_at AW153005 - - 2e+0 At3g49760 AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5) C.G. S.X.
0.42 4e-31 137 Oryza sativa Os01g0167400 AB051107.1 - Protein synthesis inhibitor II (EC 3.2.2.22)(Ribosome-inactivating protein II) (rRNA N-glycosidase) 7e-1 At5g59220 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.03 1e-2 42 Populus trichocarpa PtpAffx.117529.1.S1_at DN495961 multidrug/pheromone exporter, MDR family, ABC transporter family - 3e+0 At5g03370 acylphosphatase family C.G. S.X.
0.82 0 1180 Triticum aestivum Ta.13191.1.S1_x_at BQ806711 - - 8e+0 At4g28250 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) C.G. S.X.
0.03 2e-4 46 Vitis vinifera 1615721_at CA818745 - - 4e+0 At3g23620 brix domain-containing protein C.G. S.X.
0.03 2e-1 36 Zea mays Zm.18097.1.A1_at CF635499 - - 8e-2 At1g72230 plastocyanin-like domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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