Gene omics information

Query gene ID Contig5149_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6380.3Contig5149_atContig5149--4e-2At1g66670CLPP3S.X.H.G.
0.8394.0Contig6254_atContig6254--3e+0At2g37950zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.8394.0Contig11168_atContig11168--1e-15At5g12480CPK7 (calmodulin-domain protein kinase 7)S.X.H.G.
0.8092.5Contig11519_atContig11519--2e-4At1g66680AR401S.X.H.G.
0.7187.1Contig15950_atContig15950--1e+0At1g15220CCMHS.X.H.G.
0.5774.9Contig11041_atContig11041--1e+0At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.497.5GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.197.3GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.997.1GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.696.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.296.3GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.895.7GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. Dicktoo
3.895.7GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.895.7GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.795.5GSM261062Xantha s-46 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.695.3GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034HA02d18r_atHA02d18r--1e+0At5g13250unknown proteinC.G.S.X.
0.021e+034Contig6892_s_atContig6892--1e+0At5g19810proline-rich extensin-like family proteinC.G.S.X.
0.011e+034Contig5513_atContig5513--2e+0At3g02830ZFN1 (ZINC FINGER PROTEIN 1)C.G.S.X.
0.011e+034Contig5513_s_atContig5513--2e+0At3g02830ZFN1 (ZINC FINGER PROTEIN 1)C.G.S.X.
0.011e+034Contig11889_atContig11889--2e+0At5g15890unknown proteinC.G.S.X.
0.011e+034Contig10811_atContig10811--1e-1At5g48680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.011e+034Contig7832_atContig7832--5e-34At3g61130GAUT1 (GALACTURONOSYLTRANSFERASE 1)C.G.S.X.
0.025e+032Contig2247_s_atContig224710.2 kDa photosystem I polypeptide-1e+0At3g59190F-box family proteinC.G.S.X.
0.015e+032Contig7585_atContig7585--2e+0At3g54490RPB5E (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, E)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-240Arabidopsis thalianaAt1g66670842985CLPP3One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).---C.G.S.X.
0.064e-963Glycine maxGmaAffx.8607.1.S1_atAW156502--1e-26At1g66670CLPP3C.G.S.X.
0.475e-108393Oryza sativaOs01g0507900AK102473.1-NClpP3 (ATP-dependent Clp protease proteolyticsubunit ClpP3)3e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.152e-1481Populus trichocarpaPtpAffx.203954.1.S1_atpmrna7806hypothetical protein-8e-24At1g66670CLPP3C.G.S.X.
0.8501788Triticum aestivumTa.9414.1.S1_a_atBE516122--6e-1At1g79970-C.G.S.X.
0.139e-1373Vitis vinifera1616095_atCF603382hypothetical protein LOC100265683-1e-45At1g66670CLPP3C.G.S.X.
0.457e-113406Zea maysZm.5047.1.A1_atBM382663ATP-dependent Clp protease proteolytic subunit 1-6e-4At1g66670CLPP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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