Gene omics information

Query gene ID Contig5001_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5268.3Contig5001_s_atContig5001--3e-1At5g09440EXL4 (EXORDIUM LIKE 4)S.X.H.G.
0.9398.7Contig12402_atContig12402--3e+0At3g05490RALFL22 (ralf-like 22)S.X.H.G.
0.9398.7HVSMEg0001N20r2_atHVSMEg0001N20r2--3e+0At4g03050AOP3S.X.H.G.
0.8694.8Contig2041_x_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.7187.1Contig6006_s_atContig6006--3e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeS.X.H.G.
0.7086.0Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.6784.7Contig8898_atContig8898--2e-29At2g25570bindingS.X.H.G.
0.6784.7Contig6005_x_atContig6005--3e-1At1g20130hydrolase, acting on ester bonds / lipase/ structural constituent of cell wallS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.099.8GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
21.599.8GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
21.399.7GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
17.799.7GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
16.399.6GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
15.799.6GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
12.399.4GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
12.099.3GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.999.3GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
11.499.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.208e-34143Contig5002_atContig5002--8e-3At1g22680unknown proteinC.G.S.X.
0.021e-136Contig19407_atContig19407--5e-1At1g32580plastid developmental protein DAG, putativeC.G.S.X.
0.021e-136Contig13130_atContig13130--6e-1At4g16380metal ion bindingC.G.S.X.
0.021e-136Contig5238_atContig5238--2e-16At3g12290tetrahydrofolate dehydrogenase/cyclohydrolase, putativeC.G.S.X.
0.025e-134Contig7203_atContig7203--2e-7At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)C.G.S.X.
0.015e-134Contig7802_atContig7802--4e-9At2g37500arginine biosynthesis protein ArgJ familyC.G.S.X.
0.045e-134Contig18032_atContig18032--1e+0At4g38090unknown proteinC.G.S.X.
0.035e-134Contig19225_atContig19225--4e+0At2g07820unknown proteinC.G.S.X.
0.025e-134Contig12973_atContig12973--2e+0At1g6000029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-136Arabidopsis thalianaAt5g09440830803EXL4 (EXORDIUM LIKE 4)F:molecular_function unknown;P:biological_process unknown;C:membrane;PB---C.G.S.X.
0.032e+034Glycine maxPsAffx.C24000081_atPsAffx.C24000081--5e-1At4g29810ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2)C.G.S.X.
0.237e-1995Oryza sativaOs11g0113300BX898462-Conserved hypothetical protein5e-1At4g20470unknown proteinC.G.S.X.
0.094e-136Populus trichocarpaPtp.6340.1.S1_atBU888207hypothetical protein-2e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.708e-159559Triticum aestivumTa.7288.1.S1_atBJ318237--3e-1At5g09440EXL4 (EXORDIUM LIKE 4)C.G.S.X.
0.099e-546Vitis vinifera1619815_atCB973946hypothetical protein LOC100267277-4e-7At5g58375unknown proteinC.G.S.X.
0.362e-21101Zea maysZm.1615.1.S1_atAY106014.1hypothetical protein LOC100279676-1e+0At5g23405high mobility group (HMG1/2) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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