Gene omics information

Query gene ID Contig484_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7388.7Contig484_x_atContig484--1e-38At1g09200histone H3S.X.H.G.
0.5774.9Contig484_s_atContig484--1e-38At1g09200histone H3S.X.H.G.
0.1818.2Contig10108_atContig10108--2e-1At3g22830AT-HSFA6BS.X.H.G.
0.1514.1Contig15357_atContig15357--3e-1At1g24440protein binding / zinc ion bindingS.X.H.G.
0.1412.9Contig4789_atContig4789--1e-14At5g42790PAF1S.X.H.G.
0.075.8Contig17421_atContig17421--4e+0At1g45248-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.9100.0GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
44.999.9GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
42.299.9GSM431571pathogen isolates: Polymyxa betae - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
33.699.9GSM431551pathogen isolates: Polymyxa graminis - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
30.899.9GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
28.599.8GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
26.399.8GSM431572pathogen isolates: Polymyxa betae - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
22.299.8GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
19.699.7GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
17.799.7GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001723Contig484_s_atContig484--1e-38At1g09200histone H3C.G.S.X.
0.260981Contig711_s_atContig711--3e-2At5g53590auxin-responsive family proteinC.G.S.X.
0.390704Contig320_atContig320--3e+0At5g35520MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)C.G.S.X.
0.381e-157555Contig141_atContig141--9e-45At1g09200histone H3C.G.S.X.
0.362e-155547Contig196_s_atContig196--1e-44At1g09200histone H3C.G.S.X.
0.333e-130464Contig349_s_atContig349--6e-52At1g09200histone H3C.G.S.X.
0.334e-129460Contig338_s_atContig338--2e-39At1g09200histone H3C.G.S.X.
0.334e-129460Contig338_atContig338--2e-39At1g09200histone H3C.G.S.X.
0.332e-128458Contig657_s_atContig657--1e-49At1g09200histone H3C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.291e-38161Arabidopsis thalianaAt1g09200837440histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO---C.G.S.X.
0.562e-133476Glycine maxGmaAffx.1301.92.S1_s_atBM527505--3e+0At2g38610KH domain-containing proteinC.G.S.X.
0.420831Oryza sativaOs03g0288400AK063268.1-Conserved hypothetical protein3e+0At1g77470replication factor C 36 kDA, putativeC.G.S.X.
0.250672Populus trichocarpaPtpAffx.250003.1.S1_s_at19919559--8e-15At2g01021unknown proteinC.G.S.X.
0.547e-139494Triticum aestivumTaAffx.128418.141.S1_atCA678595--1e+0At5g02160unknown proteinC.G.S.X.
0.301e-66252Vitis vinifera1617502_s_atCD797339--4e+0At5g67490unknown proteinC.G.S.X.
0.303e-111400Zea maysZm.14513.1.A1_atCA828306Histone H3.2-6e-37At1g09200histone H3C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage