CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig4773_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.47 62.2 Contig4773_at Contig4773 - - 8e+0 At5g62720 integral membrane HPP family protein S.X. H.G.
0.74 89.1 Contig24268_at Contig24268 - - 2e+0 At5g57345 unknown protein S.X. H.G.
0.63 80.3 Contig4494_x_at Contig4494 - - 5e+0 At5g55508 unknown protein S.X. H.G.
0.56 74.3 Contig9113_s_at Contig9113 - - 2e-26 At5g11980 conserved oligomeric Golgi complex component-related / COG complex component-related S.X. H.G.
0.56 74.3 HVSMEh0085G19f_at HVSMEh0085G19f - - 3e+0 At1g75510 transcription initiation factor IIF beta subunit (TFIIF-beta) family protein S.X. H.G.
0.48 63.2 Contig6325_at Contig6325 - - 4e-1 At5g25490 zinc finger (Ran-binding) family protein S.X. H.G.
0.46 61.0 Contig12027_at Contig12027 ORG4 - 2e-3 At2g06010 ORG4 (OBP3-RESPONSIVE GENE 4) S.X. H.G.
0.44 58.9 HY02G07u_at HY02G07u - - 4e+0 At2g28420 lactoylglutathione lyase family protein / glyoxalase I family protein S.X. H.G.
0.38 49.5 HVSMEn0011A10f_x_at HVSMEn0011A10f - - 2e+0 At3g47990 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.2 99.4 GSM398274 Moroc9-75_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.8 99.2 GSM398283 Moroc9-75_5d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.6 99.2 GSM398275 Moroc9-75_0d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
10.1 99.1 GSM398280 Moroc9-75_3d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.7 99.0 GSM398250 Martin_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.3 99.0 GSM398251 Martin_0d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.0 98.9 GSM398270 HS41-1_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.8 98.9 GSM398279 Moroc9-75_3d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.4 98.8 GSM398269 HS41-1_3d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.1 98.7 GSM398268 HS41-1_3d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 1713 Contig4774_s_at Contig4774 - - 8e+0 At5g62720 integral membrane HPP family protein C.G. S.X.
0.01 3e-4 46 Contig11063_at Contig11063 - - 3e-1 At5g11770 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial C.G. S.X.
0.03 7e-2 38 HE01F04u_s_at HE01F04u - - 3e+0 At1g51913 unknown protein C.G. S.X.
0.01 3e-1 36 Contig4288_at Contig4288 - - 2e-1 At5g24400 emb2024 (embryo defective 2024) C.G. S.X.
0.02 1e+0 34 Contig17345_at Contig17345 - - 6e-3 At2g20750 ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1) C.G. S.X.
0.02 1e+0 34 Contig13743_at Contig13743 - - 1e+0 At3g61172 LCR8 (Low-molecular-weight cysteine-rich 8) C.G. S.X.
0.02 1e+0 34 Contig25977_at Contig25977 - - 1e+0 At3g28680 prolylcarboxypeptidase-related C.G. S.X.
0.02 1e+0 34 Contig10491_at Contig10491 - - 2e+0 Atmg01100 - C.G. S.X.
0.02 1e+0 34 Contig17978_at Contig17978 - - 2e-2 At3g47470 LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Arabidopsis thaliana At5g62720 836393 integral membrane HPP family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast inner membrane, chloroplast envelope;OBFP - - - C.G. S.X.
0.02 3e+0 34 Glycine max PsAffx.CL94Contig1_at PsAffx.CL94Contig1 - - 5e+0 At2g31090 unknown protein C.G. S.X.
0.32 3e-96 353 Oryza sativa Os02g0556800 AK100187.1 - Conserved hypothetical protein 3e-2 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.216607.1.S1_at pmrna31507 hypothetical protein - 3e+1 At5g26270 unknown protein C.G. S.X.
0.76 0 961 Triticum aestivum Ta.645.1.S1_a_at CK212406 - - 9e+0 At2g28550 RAP2.7 (RELATED TO AP2.7) C.G. S.X.
0.02 1e+1 30 Vitis vinifera 1621906_s_at CF205801.1 hypothetical protein LOC100258001 - 7e+0 Atcg00440 - C.G. S.X.
0.31 1e-80 299 Zea mays Zm.10811.2.S1_at BM079148 - - 8e+0 At4g14730 transmembrane protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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