Gene omics information

Query gene ID	Contig4769_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	74.9	Contig4769_at	Contig4769	-	-	3e-5	At2g32520	dienelactone hydrolase family protein	S.X.	H.G.	Please select
0.50	66.9	HU05K13u_s_at	HU05K13u	-	-	3e-1	At2g34560	katanin, putative	S.X.	H.G.	Please select
0.21	22.6	EBem06_SQ003_J07_at	EBem06_SQ003_J07	-	-	3e+0	At2g42530	COR15B (COLD REGULATED 15B)	S.X.	H.G.	Please select
0.21	22.6	Contig3170_at	Contig3170	-	-	4e-45	At1g07410	ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)	S.X.	H.G.	Please select
0.13	11.6	HW09F23V_s_at	HW09F23V	-	-	3e+0	At4g10240	zinc finger (B-box type) family protein	S.X.	H.G.	Please select
0.07	5.8	Contig2764_s_at	Contig2764	-	-	3e-9	At5g54190	PORA	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.2	99.7	GSM282020	Malting_day4_Legacy_rep 3	GSE11200	Expression data from malting barley seeds
13.4	99.4	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
13.2	99.4	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
12.1	99.3	GSM71149	OWB-R unstress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
11.7	99.3	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
11.6	99.3	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
11.3	99.3	GSM71158	Steptoe stress and unstress replicate 2	GSE3170	Barley single feature polymorphisms and drought stress gene expression
10.8	99.2	GSM282021	Malting_day4_Legacy_rep 2	GSE11200	Expression data from malting barley seeds
10.8	99.2	GSM71144	OWB-R stress replicate 3	GSE3170	Barley single feature polymorphisms and drought stress gene expression
10.0	99.1	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.83	0	1499	Contig4768_s_at	Contig4768	-	-	4e-5	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Contig11383_at	Contig11383	-	-	2e+0	At4g36560	unknown protein	C.G.	S.X.	Please select
0.02	8e-1	34	Contig7195_at	Contig7195	-	-	5e-1	At5g41210	ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)	C.G.	S.X.	Please select
0.02	8e-1	34	Contig13553_at	Contig13553	-	-	9e-6	At4g21192	-	C.G.	S.X.	Please select
0.01	8e-1	34	Contig10926_at	Contig10926	-	-	3e-6	At3g26790	FUS3 (FUSCA 3)	C.G.	S.X.	Please select
0.01	8e-1	34	Contig10084_at	Contig10084	-	-	5e-2	At5g66460	(1-4)-beta-mannan endohydrolase, putative	C.G.	S.X.	Please select
0.01	8e-1	34	Contig4938_s_at	Contig4938	-	-	8e-47	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	C.G.	S.X.	Please select
0.03	3e+0	32	Contig25889_at	Contig25889	-	-	3e+0	At2g34530	unknown protein	C.G.	S.X.	Please select
0.01	3e+0	32	Contig1615_s_at	Contig1615	-	-	2e-103	At5g42020	BIP2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.26	3e-5	50	Arabidopsis thaliana	At2g32520	817813	dienelactone hydrolase family protein	F:hydrolase activity;P:biological_process unknown;C:chloroplast;BOMPAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	7e-16	85	Glycine max	Gma.3521.1.S1_at	CF920340	-	-	1e-47	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please select
0.53	2e-171	603	Oryza sativa	Os01g0531500	AK106208.1	-	Dienelactone hydrolase domain containing protein	2e-10	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.28	1e-23	111	Populus trichocarpa	Ptp.6255.1.S1_at	CV232268	hypothetical protein	-	7e-75	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.64	0	1053	Triticum aestivum	Ta.2853.1.S1_at	BJ306897	-	-	2e-6	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please select
0.18	4e-11	67	Vitis vinifera	1618393_at	CF516653	hypothetical protein LOC100265397	-	1e-41	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please select
0.47	2e-146	517	Zea mays	Zm.865.1.S1_at	CF045946	protein usf	-	2e-10	At2g32520	dienelactone hydrolase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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