Gene omics information

Query gene ID Contig4748_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5470.3Contig4748_atContig4748--2e-2At1g76400ribophorin I family proteinS.X.H.G.
0.7187.1rbah15o14_s_atrbah15o14--6e-1At5g15840CO (CONSTANS)S.X.H.G.
0.6480.9Contig2967_atContig2967--4e-2At4g28250ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)S.X.H.G.
0.6279.1Contig11921_atContig11921--1e-2At5g20560beta-1,3-glucanase, putativeS.X.H.G.
0.5369.7Contig19538_atContig19538--2e+0At3g51140-S.X.H.G.
0.5066.9Contig16729_atContig16729--9e+0At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
0.5066.9Contig25159_atContig25159--8e-12At2g35800mitochondrial substrate carrier family proteinS.X.H.G.
0.4863.2Contig2932_atContig2932--2e-4At5g21090leucine-rich repeat protein, putativeS.X.H.G.
0.4053.1Contig22786_atContig22786--9e+0At5g36710unknown proteinS.X.H.G.
0.3647.1Contig8703_atContig8703--2e-42At3g21720ICL (ISOCITRATE LYASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.798.9GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.198.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.298.0GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.697.7GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
5.397.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.297.4GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.197.3GSM146374Golden Promise shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.197.3GSM146370Golden Promise shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.197.3GSM146371Golden Promise shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.097.2GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9503911Contig4748_s_atContig4748ribophorin I-2e-2At1g76400ribophorin I family proteinC.G.S.X.
0.093e-36153Contig11959_atContig11959--5e-1At1g11890SEC22C.G.S.X.
0.013e-240Contig8721_atContig8721--2e-14At3g52200LTA3C.G.S.X.
0.011e-138Contig9252_atContig9252--2e-47At4g38620MYB4C.G.S.X.
0.011e-138Contig9904_atContig9904--1e-1At1g54215proline-rich family proteinC.G.S.X.
0.031e-138Contig6232_atContig6232--8e-1At2g01720ribophorin I family proteinC.G.S.X.
0.015e-136Contig24580_atContig24580--7e+0At4g11510RALFL28 (ralf-like 28)C.G.S.X.
0.015e-136Contig9994_atContig9994--7e-2At5g60490FLA12C.G.S.X.
0.015e-136Contig26518_atContig26518--2e+0At2g46160zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-242Arabidopsis thalianaAt1g76400843972ribophorin I family proteinF:oligosaccharyl transferase activity, dolichyl-diphosphooligosaccharide-protein glycotransferase activity;P:protein amino acid glycosylation;C:endoplasmic reticulum, membrane;MFOPA---C.G.S.X.
0.091e-450Glycine maxGma.5152.2.S1_atAW460086--7e-11At1g76400ribophorin I family proteinC.G.S.X.
0.7201493Oryza sativaOs05g0301500AK067027.1-Ribophorin I (Fragment)7e-5At1g76400ribophorin I family proteinC.G.S.X.
0.024e-448Populus trichocarpaPtp.1302.1.S1_atCK092616hypothetical protein-9e-13At2g01720ribophorin I family proteinC.G.S.X.
0.241e-46188Triticum aestivumTaAffx.30439.1.S1_atCA625281--1e+0At4g13080xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.013e-136Vitis vinifera1617233_atCF604441hypothetical protein LOC100266540-1e+0At3g18710PUB29 (PLANT U-BOX 29)C.G.S.X.
0.700874Zea maysZm.13444.1.S1_atCD441205dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit-2e-2At1g76400ribophorin I family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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