Gene omics information

Query gene ID	Contig4737_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	72.0	Contig4737_s_at	Contig4737	-	-	3e-29	At2g35040	AICARFT/IMPCHase bienzyme family protein	S.X.	H.G.	Please select
0.61	78.7	Contig10954_at	Contig10954	-	-	4e+0	At3g21175	ZML1 (ZIM-LIKE 1)	S.X.	H.G.	Please select
0.60	77.3	Contig12594_at	Contig12594	-	-	3e+0	At5g11990	proline-rich family protein	S.X.	H.G.	Please select
0.50	66.9	Contig14154_at	Contig14154	-	-	2e+0	At1g60320	Toll-Interleukin-Resistance (TIR) domain-containing protein	S.X.	H.G.	Please select
0.50	66.9	Contig9632_at	Contig9632	-	-	1e-1	At1g78370	ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)	S.X.	H.G.	Please select
0.48	63.2	Contig416_x_at	Contig416	-	-	5e-29	At4g24190	SHD (SHEPHERD)	S.X.	H.G.	Please select
0.38	49.5	Contig4763_at	Contig4763	-	-	3e-7	At4g39960	DNAJ heat shock family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.2	99.0	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.3	98.8	GSM372999	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.1	98.7	GSM373000	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.0	98.7	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
7.7	98.6	GSM372977	genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.6	98.6	GSM372980	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.1	98.4	GSM372989	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.6	97.7	GSM372994	genotype: 11542 - pathogen isolates: K1 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM372997	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	8e-176	617	HVSMEi0012K07r2_s_at	HVSMEi0012K07r2	-	-	1e+1	At5g15910	dehydrogenase-related	C.G.	S.X.	Please select
0.01	1e-1	38	Contig16321_at	Contig16321	-	-	1e-2	At1g54570	esterase/lipase/thioesterase family protein	C.G.	S.X.	Please select
0.01	1e-1	38	Contig592_at	Contig592	-	-	2e-4	At1g11860	aminomethyltransferase, putative	C.G.	S.X.	Please select
0.01	1e-1	38	Contig3798_at	Contig3798	-	-	1e-30	At2g40290	eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative	C.G.	S.X.	Please select
0.01	1e-1	38	Contig3148_at	Contig3148	-	-	2e-5	At1g09940	HEMA2	C.G.	S.X.	Please select
0.01	6e-1	36	Contig4541_at	Contig4541	-	-	1e-4	At5g63980	SAL1	C.G.	S.X.	Please select
0.01	6e-1	36	Contig2168_s_at	Contig2168	-	-	2e-63	At4g13930	SHM4 (serine hydroxymethyltransferase 4)	C.G.	S.X.	Please select
0.01	6e-1	36	Contig10968_at	Contig10968	-	-	4e-15	At4g34460	AGB1 (GTP BINDING PROTEIN BETA 1)	C.G.	S.X.	Please select
0.01	6e-1	36	Contig16816_at	Contig16816	-	-	5e+0	At5g25940	early nodulin-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	3e-29	131	Arabidopsis thaliana	At2g35040	818069	AICARFT/IMPCHase bienzyme family protein	F:phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity;P:response to cold, purine nucleotide biosynthetic process;C:stromule, chloroplast, chloroplast stroma;OBMFAPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.21	2e-24	115	Glycine max	GmaAffx.17355.1.S1_at	BQ453853	-	-	1e-57	At2g35040	AICARFT/IMPCHase bienzyme family protein	C.G.	S.X.	Please select
0.59	0	1316	Oryza sativa	Os08g0206600	AK064336.1	-	AICARFT/IMPCHase bienzyme family protein	3e-47	At2g35040	AICARFT/IMPCHase bienzyme family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	2e-24	115	Populus trichocarpa	Ptp.5201.1.S1_at	CV240790	aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase	-	3e-33	At2g35040	AICARFT/IMPCHase bienzyme family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.75	0	2389	Triticum aestivum	Ta.7209.1.S1_at	BQ169528	-	-	9e-32	At2g35040	AICARFT/IMPCHase bienzyme family protein	C.G.	S.X.	Please select
0.01	1e+0	34	Vitis vinifera	1607588_at	CF204557.1	-	-	4e-25	At3g06860	MFP2 (MULTIFUNCTIONAL PROTEIN 2)	C.G.	S.X.	Please select
0.31	1e-66	254	Zea mays	Zm.18318.1.S1_at	CF007597	-	-	1e-17	At2g35040	AICARFT/IMPCHase bienzyme family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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